Rhododendron vialii: 131312797
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Entry
131312797 CDS
T09330
Name
(RefSeq) DNA topoisomerase 2-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvl03032
]
131312797
03036 Chromosome and associated proteins [BR:
rvl03036
]
131312797
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
131312797
DNA replication proteins [BR:
rvl03032
]
Eukaryotic type
DNA Topoisomerases
131312797
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
131312797
Centrosome formation proteins
Centriole proteins
131312797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
HATPase_c
Toprim
DUF2175
Motif
Other DBs
NCBI-GeneID:
131312797
NCBI-ProteinID:
XP_058196759
LinkDB
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Position
13a:26491615..26502493
Genome browser
AA seq
1224 aa
AA seq
DB search
MVPNKKLPLQSSTAGNILPLPPQPPSKTIEEIYQKRSQREHILLRPDTYIGSIIKNTQTL
WVYENGSMVSRPVTYVPGLYKIFDEILVNAADNKQRDPSMDSLKVEIDAGENRISVYNNG
SGIPVAKHGDAKVYVAEMVFGQLLTSSNYDDRAKKTTGGRNGYGAKLTNIFSTEFVVETA
DGEREKKYKQVFSNNMNKKTNPSITKCSKGENWTRVSFKPDLAKFQMESLEDDAVALMSK
RVVDVAGCLGESVKVELNGQQVPVNSFLDYVNLYLQFDADPKTDSIPRFVEKVNDRWEIC
ICVREGRFDQVSFVNGIATVKGGTHVNCVTEQIENYVVEKVHQMKKDVDNIQSHAVKNHL
WIFVKALIDNPSFSSQTKMTLTTKEENFGSSCILSDEFLNKVSEAGIVESLLSWADYKLK
REQKKADAAKRKRITGIPKLEDANDAGGENSNKCTLILTEGDSAKALAMAGISEVGRNHY
GVFPLRGKLLNVREANNWQVDSNEEIQSIQRILGLEKGKQYDCVESLRYGHLMIMTDQDH
DGSHIKGLLINFIHTLWPSLLRIPSFLLEFITPIVKATQRSGVVLSFYSMPEYESWKESL
QGNTSGWSIKYYKGLGTSTSKEGKEYFQGIESHRKDFAWLDDKDGAAIELAFSKNKIEAR
KNWLRKFEPGTYLDQKEKHIRYRDFVNKELILFSMADLQRSIPSVVDGLKPGQRKILFCS
FKRNFFKEAKVAQFSGYVSEHSAYHHGEQSLASTIVGMAQDYVGSNNINLLQPNGQFGTR
HQGGKDHASARYIYTCLSPFTRVLFPKNDDLLLNYLNDDGQSIEPTWYMPIIPMVLVNGA
EGIGTGWSTYIPNYNPRNIISNVRKMLDGKPMEPMDPWYRGFRGTIEKTTQKGSGASYTV
TGIIEEVNKTIVRITELPVRKSTEEYKQFLDSIMKTSSKKNELFIKDFKEYNDDTNVDFE
ISLSEKTLSAAKEEGLAKKFKLTTTISTSNMHLFDPKGVLKKYETPEEILEEFFHLRLEF
YGKRKEVLLNVLQSELLKLENKVRFIEGVVDGDIIVTNRKRADLFFELKQKGFAQFQTKI
IELGVSGGTEGNGENGYDYLVSIPIGTLILEKVRELRAERDKINGEVDDLKKATPMSLWT
KDLDALEKELDGNYEAKVEVMNGSSAKVSREAPKKPRRSYAKKANNVETTPKPVIESVTP
AAEIGKYFNHSRFSSYIIDSRLPS
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggttccgaataagaagctgccgctgcaaagcagcaccgcgggcaacatcctccccctg
ccaccgcaaccgccgtcgaaaacaattgaagaaatctaccagaagaggtcccagcgggaa
cacatcctgctccggcccgacacctacatcgggtccatcatcaagaacacccagaccctc
tgggtgtacgagaacgggtcgatggtgagccggcccgtgacctacgtgccgggcctctac
aagatcttcgacgagatcctggtgaacgcggcggacaacaagcagcgggacccgtccatg
gactcgctcaaggtggagatcgacgccggggagaaccggatcagcgtctacaacaacggc
tccgggatccccgtggccaagcacggggacgccaaggtctacgtggcggagatggtgttc
gggcagcttctgacgagtagtaactacgatgaccgggcgaagaagacgaccggggggagg
aacgggtacggggcgaagctgaccaatattttctcgacggagttcgtggtggagacggcg
gatggggagcgggagaagaagtataagcaggtgttttcaaacaacatgaacaagaaaacc
aatcccagcataaccaagtgcagcaaaggagagaattggaccagagtttcattcaagcct
gatctggccaagtttcagatggaatccctagaggatgatgcggtggcactgatgagcaag
agggtggttgatgttgcggggtgcctaggtgagtcagtcaaggttgagctgaatgggcag
caggttcctgtcaactcattccttgattatgtcaatctctaccttcaatttgatgccgat
cccaagacagattccatacccaggtttgtggaaaaagttaatgataggtgggaaatctgc
atttgtgtgcgagaaggtcgctttgatcaggtcagcttcgtgaatggaattgcgacagtg
aaaggtgggactcatgtgaattgtgtaactgagcagattgaaaattatgtggtagaaaaa
gtacatcagatgaagaaagatgttgacaatatccaatcccatgctgtgaaaaaccatcta
tggatctttgttaaggctctcattgacaacccttcgtttagttctcaaacaaagatgaca
ttaacaaccaaagaagaaaattttggatccagctgcatactctcggatgagttcttaaat
aaagtatctgaggcaggaatagtggagagtctcctctcatgggcagattataaattgaaa
agagaacaaaagaaagctgatgcagccaagaggaaaaggattactggcatccctaagctt
gaggatgctaatgatgccggaggggagaactccaacaagtgtactctgattttgacagaa
ggagattcagctaaagcccttgcaatggctgggatttcagaggtgggtagaaatcattat
ggagtgttcccattgagaggtaaactgctaaatgtgagggaagctaacaactggcaggtc
gattccaatgaagagatccagagcatccagaggatccttggactggagaaagggaaacag
tatgattgtgttgagtccctgagatatgggcatttgatgattatgactgatcaggatcat
gatgggtctcacatcaagggactcttgattaattttattcacacactctggccatcgctt
cttagaattccatcattccttcttgagttcattacgcctattgtgaaggcaactcaaaga
agtggagtggttctgtccttctactcaatgccagaatatgagtcatggaaagaaagcttg
cagggaaataccagtggctggtcaatcaaatattacaagggtctgggaacaagtacatcc
aaggaagggaaggagtatttccaaggaatagaaagtcacaggaaagatttcgcgtggtta
gatgataaagatggggctgcgattgagcttgcattcagcaagaacaagatagaagcaagg
aagaattggctccgaaaattcgagccgggtacttaccttgatcagaaggagaagcatatc
aggtaccgagactttgtgaacaaggagctcattctgttttccatggcagatcttcaaaga
tcaataccttcagttgttgatggattgaaaccgggtcagaggaaaattttgttttgctct
tttaaaagaaattttttcaaggaggcaaaggttgctcagttttctgggtatgtgtcggag
cattcagcttatcaccatggggagcagagtcttgccagcaccatagttggaatggcacag
gattatgtaggcagcaacaacatcaacttactccaaccaaatggacaatttggcacaagg
caccagggtggaaaagatcatgcaagtgcaaggtacatttacacttgtctttctccattc
acaagggtcttgttccccaagaatgatgatctccttctcaactatttgaatgacgatggg
caatcaattgaacccacttggtacatgcccataattcctatggttttggtcaacggcgct
gaaggaattggaaccggatggagcacttatatcccgaattataacccgagaaacataatc
agtaatgtgaggaaaatgttggatggtaaaccgatggagcccatggatccatggtacaga
ggtttcagaggcaccatagagaaaacaacacaaaagggaagtggagcaagctacacagtt
actgggattattgaggaagtcaacaagacaattgtgaggatcactgaactacctgtccgg
aagtcgactgaggaatacaagcagttcttggactcaataatgaagacgagtagcaaaaag
aatgagctatttattaaggacttcaaggagtacaatgatgacacaaatgtagatttcgaa
atttccctgtccgaaaagaccttgagtgcagccaaagaagaaggtttggcgaagaagttt
aagcttaccacaacaatcagcacaagcaacatgcacctttttgacccaaaaggcgtgctc
aagaaatatgaaacccccgaagagattcttgaggaattcttccatttgaggcttgaattc
tacgggaaaagaaaggaagttctgttgaatgttcttcaatctgagttgttgaaactggag
aacaaggttaggttcatcgaaggtgttgtggatggagatattatcgtgactaacaggaag
agagctgatttgttcttcgagctgaaacaaaagggttttgctcagttccaaacgaagatc
attgaattgggtgtttctggaggaactgagggaaatggagagaacggttatgattatctt
gtgtccataccaattgggacattgatactggaaaaggtcagggagctacgggccgaaagg
gacaagattaatggtgaagttgatgacttgaaaaaggccactccaatgtccttgtggaca
aaggacttagatgctcttgagaaggaacttgatggtaactatgaagctaaggtagaggtt
atgaatggaagcagtgctaaagtttcaagagaagctccgaagaagccacgacggagttat
gcaaagaaagccaataatgtggagactactccgaaaccagttatagaatcagttacgcct
gctgcggaaataggcaagtattttaatcattcacgtttttcaagttatattattgattca
agattacctagttga
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