Rhododendron vialii: 131312810
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Entry
131312810 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131312810 isoform X1
KO
K07456
DNA mismatch repair protein MutS2
Organism
rvl
Rhododendron vialii
Pathway
rvl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131312810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131312810
DNA repair and recombination proteins [BR:
rvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
131312810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
DNA_pol3_gamma3
DUF4743
OmpH
AAA_22
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
131312810
NCBI-ProteinID:
XP_058196783
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Position
13a:26665371..26673298
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AA seq
919 aa
AA seq
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MELCKTLLIPIRPPPPHLRRALPHRPVKPTASLSTFPTTTPPESTPRLSLAESLQNETLQ
TLEWPSVCKQVSAFTSTTMGFSAAQAGRLPLGRSPEESRRLLDQTAAAAALSRPLDFSGI
EDVSETVRVSVSGELVTIGELCAVKRTLRSARELLGQLEELASRDDDSRERCVPLLEILQ
SCNFLSGLEQKIGYCIDCDFSRVLDRASEDLEIIRSERKRNMERLDSLLKKVSALILQGG
GIDRPLITKRRSRMCVGIRASHRSLLPDGIVLNISSSGATYFIEPKEAVELNNLEVRLSN
SEKVEEQVILSLLSSVIAESEIEIKDLLDRILELDLAVARAAHGLWMHGICPSLSSECFE
SSKTESSLAIDIEAIQHPLLLETSLRSSSDPIESKSRSSDPVNEGNGAMKFEVISGSSDF
PVPIDIKIGHGTRVVVISGPNTGGKTASMKTLGLASVMSKAGMYLPAKKQSTLPWFDFIL
ADIGDHQSLEQNLSTFSGHIRQLCKILEVASKESLVLIDEIGSGTDPSEGVALSASILQY
LKARVKLAVVTTHYADLSLLKETDTRFENAAMEFSLETLQPTFQILWGSRGDSNALSIAK
TIGFDDKIIEHAHVWVKKLMPEKQQMRQSLLYQSLMDEKNRLEIQAMRVTSLHSDIMKLY
REIRDEAEDLDGREAALMATETQKVKQEIKAAKSQMEAVLQEFENQLRTTSANQVTSLIN
KSESAIASIVEAHCPSDVFSTREAGDSSYTPQIGDQVHVEGLRNKLATIIEAPGDEATVL
VQCGKVRVRVNRSTITARKRSNAVAAKSSAPPLKRKVQGSRNSRNILDLSNDEEDSYAPV
VPTSRNTVDLRGMRAEEASHYLNIAISSRESKSVMFIIHGTGMGVIKERTIQILKNHPRV
TKFEQESPMNFGCTVAYIN
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggagctctgcaaaaccctcctcatccctatccgcccacctccgccgcatctccgccgc
gccctccctcaccgccccgtcaaacccaccgcttctctctccaccttccccaccaccacc
cctcccgagtccactccccgactcagcctcgccgagtccctccaaaacgagaccttgcaa
accctagaatggccctccgtctgcaaacaggtctcggcattcacctccaccaccatgggc
ttctcagccgcgcaggccggccgcctcccgctgggaaggagcccggaggagagccgccgg
ctcctggaccagaccgccgcggccgcggcgctctctcgtccgctggatttctcggggatc
gaggacgtgtcggagaccgtgagggtttcggtttctggtgaattagtcactattggtgag
ctttgtgctgtgaaacggactttaagatcggctagagagttgttagggcagctggaggag
cttgcttcccgtgatgatgactctagagagaggtgtgtgcccctgcttgaaattcttcag
agttgcaatttcctgagtgggttggagcaaaaaataggatattgtatagattgcgatttt
tcgagagtccttgatagagctagtgaagatttggagattattaggtctgaaaggaagagg
aacatggaacgtctagactctctgttgaagaaagtttcagctttgattcttcaaggtgga
ggtattgacagaccattgataacaaagcgtcgatctaggatgtgtgttggtattagggcg
tcacatagatcattgcttcctgatggtatagttctgaatattagcagttctggagcaaca
tactttatagaacccaaagaagcagtggaattgaataatttggaagtgagactttcaaac
tctgaaaaggtcgaggagcaagtcattttgagcttgctttcatctgtgattgccgaatct
gaaatagagattaaagatctcttggatagaattcttgaacttgatcttgctgttgcgaga
gctgctcatggtctgtggatgcatggcatctgtccgagtttatcttcggagtgttttgaa
tcttccaaaactgagtcttccttagccatagatattgaagctattcaacatccgctgctc
cttgagacctctctgagaagttcatcagatcctatagaatccaaatctaggagttcagac
cctgtaaatgaaggaaatggtgcaatgaagtttgaagtgatttctggttcatctgatttt
cctgtgcctattgacatcaaaattggtcatggaaccagggtggttgtgatctcaggaccc
aacactggaggcaaaactgcttcaatgaaaactctagggttggcttctgtaatgtcaaaa
gctggcatgtacttgccagccaagaagcaatcaacgcttccatggtttgattttatattg
gcagacatcggagatcaccagtccttagaacaaaacctctcgactttcagtgggcacata
aggcagctgtgtaagatcttggaggtggcctcaaaagaatcactagttcttattgatgag
attgggagtgggacagatccttctgaaggtgtggctctttcagccagcatattgcagtat
ttaaaagctagggttaaattggctgtggtaactacacattatgcggatttgagtctcttg
aaagaaacagatactcgttttgagaatgctgcaatggaattttccctggagacactacaa
cctacattccagattctgtggggaagcagaggtgactcaaatgccttgagtattgctaaa
acaattggctttgatgacaaaataattgagcatgcacatgtatgggtgaagaagctgatg
ccagaaaagcagcagatgaggcaaagtttgctatatcagtcactaatggatgagaagaat
aggttggaaatccaggcaatgagagttacatctcttcattcagatattatgaagctttat
cgcgagatcagagacgaggctgaagatcttgatgggcgtgaggcagctctcatggctaca
gaaactcaaaaggtcaaacaagagataaaggctgctaaatctcagatggaagctgtattg
caagagtttgagaatcagcttagaacaacaagtgccaatcaagtgacttctctaatcaat
aagtcagagtctgcaattgcatccatagtagaagctcactgccctagtgatgttttctcc
accagagaagcaggtgacagttcttataccccacagattggagaccaagtccatgtggag
ggattaagaaataagctagctactataatcgaagctcctggtgacgaggccaccgtcctt
gtgcaatgtgggaaagtcagagttcgtgtaaatagaagcactatcacagctcgtaaacgt
agcaatgcagtcgctgcaaaaagctcggcgccacccttgaaaaggaaggttcaggggagc
agaaattcgaggaatattttggatttaagcaatgatgaggaggattcttatgcacctgtg
gtgcctacatcgaggaacacagtagacttgcgcggaatgcgagcagaggaagcttctcac
tacctcaacattgccatcagttcaagggaatctaagtcagttatgtttataatacatggg
acaggcatgggggtgattaaggagcgtactattcaaatattaaaaaaccatccacgcgtt
accaagtttgaacaggaaagcccaatgaattttggttgtacagttgcttatatcaattga
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