Rhododendron vialii: 131312817
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Entry
131312817 CDS
T09330
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
rvl
Rhododendron vialii
Pathway
rvl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131312817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131312817
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131312817
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
131312817
NCBI-ProteinID:
XP_058196799
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Position
13a:complement(25291687..25298495)
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AA seq
585 aa
AA seq
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MDPKRTRNSPELLDSSESTCLSPFPDEVLEAVLSLMESHKDRSSVSLVCRDWYNAERYTR
SHVFIGNCYSVSPEIVGRRFPRIRSVTLKGKPRFSDFNLVPENWGADVHHWLVVFAMVYP
FLEELRLKRMTVTDESLELLAYSFPNFKALSLLSCDGFSTNGLAAIASHCKNLTELDIQE
NGMEDNGGGWLSCFPEDFTSLEVLNFSSLHSDVSFDALERLVSRCKLLRVLKVNRNVNLE
QLQRLLLRAPQLTELGTGSFQQELTARQFADIEFAFSKCKNLQSLSGLWEATSLYLHVIF
PACASLTFLNLSYATLQSAELAKLLCYCPNLRRLWVLDTVEDKGLEAVGSTCPLLEELRV
FPADPFDQDIHHGVTESGFVAVSRGCRKLLYVLYFCRQMTNAAVAAIVQNCPDFTHFRLC
IMNPRQPDYLTNEPLDEAFGAVVKTCTKLQRLSVTGLLTDLTFEYIGKYAKNLETLSVAF
AGSSDWGMECVLRGCPKLRRLEIRDCPFGNAALLSGLEKYESMRSLWMSSCNVTLNGCRL
LATGMPRLNVEVMKEDESDELADKVYVYRSVAGPRRDAPPFVLTL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggatccaaagaggacgagaaactcgcccgagttactggactcatccgagtccacttgc
ctttccccattcccagatgaggtactggaagcagtactctccctcatggagtcacacaaa
gacagaagctcagtctcgctcgtgtgcagagactggtacaacgccgagcgttacacccgg
tcccatgtgttcatcggaaactgttactcggtgtcgccggagatcgtgggccggaggttt
ccaaggattcggagtgtgaccctgaaaggaaagcccaggttttcggatttcaacctcgtg
ccggagaattggggggctgatgttcaccactggctggttgtgtttgctatggtttacccg
tttttagaagagttgaggctcaagaggatgactgttactgatgagagcttggaattgttg
gcatattccttccccaatttcaaagctctttcgctgttgagttgtgatgggttcagcact
aatggccttgctgccattgcctcacattgcaagaacttgactgagcttgacattcaggag
aatggaatggaggataatggaggaggttggttaagttgctttcctgaagacttcacatca
ttagaagtactaaacttttccagcctgcacagtgatgttagttttgatgccctagagaga
cttgtatctaggtgcaagttgttgagggttttgaaggtcaataggaatgtcaacttggaa
caattacagaggttacttttaagggctcctcagttgacagagcttggtactggcagcttt
caacaagaactgacagcacgccagtttgcggacattgaatttgcattcagtaaatgcaaa
aatctgcaatccctctcaggtttatgggaagctacgtccctctatctccatgttattttc
ccagcctgtgctagtttgactttcttgaatttgagctacgcgactctgcaaagtgctgaa
cttgccaagcttctttgttactgcccaaatctacggcggctctgggtcttggacacagtg
gaggacaagggactggaggccgttgggtccacctgccccttgcttgaggaattacgtgtc
ttcccagcagatccctttgaccaggatatccaccatggcgtgaccgaatcaggttttgtc
gctgtgtctcgtggatgtcgcaaactcctgtatgtcctctacttctgccgccagatgact
aacgctgcggtggccgctatagttcagaactgcccggatttcacccacttccgcctctgt
ataatgaacccacgccaaccagactacctaaccaatgaacccttggatgaggcctttggt
gcagtggtgaagacttgcactaagcttcagaggctttcagttacaggcctcttgactgat
ctgacatttgagtacataggaaagtatgccaaaaatttggagaccctctcggtggctttt
gccggaagcagtgactgggggatggagtgtgtgttacgaggttgccctaagctgaggagg
cttgagataagagactgtccgtttgggaatgcagcacttctttccggattggagaagtac
gaatcaatgcgatctctgtggatgtcctcatgcaatgtgacattgaatgggtgtagacta
ctggcaacaggaatgccaaggttgaatgttgaggtgatgaaggaggatgagagtgatgaa
cttgctgataaagtttatgtgtaccgatctgttgcgggtcccagaagggatgctccgcct
tttgttctcacattgtga
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