Rhododendron vialii: 131313015
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Entry
131313015 CDS
T09330
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rvl01009
]
131313015
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131313015
Protein phosphatases and associated proteins [BR:
rvl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131313015
Membrane trafficking [BR:
rvl04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
131313015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
131313015
NCBI-ProteinID:
XP_058197042
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All DBs
Position
13a:complement(16283480..16319258)
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AA seq
1044 aa
AA seq
DB search
MDSKPSQSGRFVDRTNTHHTSNDNNNNNTHHKPLSRTTSSSTSSTDATSQSLASILNNPH
AVKSGLYDPSSWSGWWSSSAAATPLDFAPLSSTSKAAASVPDPTRSDFQPYLSSISGPHG
RFKDIRNHSNKESSVDDSAAEGKSSSGFGQGEALVACLREVPALYFKEDFALEEGPTFRA
ACPFSTVSENLGLQEKLSQYLDVVELHLVKEISLRSNSFFEAQGQLEDLNVKIAEGCSRI
RELKETIRLLDSDLVDSAREIQDLNSTRSNLLALQLKLRLILYVNQALSALNLLVSSADC
AGALDVTDDLQHLLDGNELTGLHCFRHLRDHVAASMDAINSILSADFMRTSIHDAGNMDA
AIMSRAKASLPMNGEVDEVHIDEEETSSFQDRLLPLVIGLLRTAKLPSVLRIYRDTLTAD
MKNAIKTAVADLLPLLLAQPLESDLAPGERVVDADGGGSSLASKLRIMPPENFVQLLTAI
LRIVKAHLVRAAEVKKAIEWIMCNIGGHYAADSVAAAIAIGAVAADASQETDGQAGSVLT
YSPQRNAARMPSLQGIPNDASGPSNMSKNFRADVLRENTEAVFAACDAAHGRWAKLLGVR
ALLHPKLRLQEFLNIYNITQDFIIATEKIGGRLGYSTRGTLQSQAKAFVDYQHETRMTYI
KAVLDQETWVEVDVPDEFQAILTSLFCSNSNGNVDDGQGEVATCYTEVASSNEDTRLPNS
QQHIAHTDYIEASADSSGQVKSLAVAGTIDNNISDVTTSPAQSNSTSNEERRRASLQTLS
FRGVDYHMVNCGLMLLKLLSEYIDMNNKLPMMSSEVVHRVFEILKFFNTRTCQLVLGAGA
MQVSGLRSITSKHLALASQVVSFTHAIIPEIRNILFSKVPETRKALLLSEIDRVAQDYKV
HRDEIHSKLVQIMRERLLVHLRSLPQIVEGWNRLEESDSQPSQFARSLTKEVGYLQRVLS
RTLHEVDVQAIFRQVVVIFHSQISEAFSNIDYSSQQAKNRLYRDIQHILGCIRSLPSDNP
SGADIPNWGQLDEFLAQRFGPDAG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaaaccttcccaatcgggaaggttcgtcgaccgcaccaacactcatcacaca
agcaacgacaacaacaacaacaacactcatcacaaacccctcagccgcacaacttcctcc
tccacctcctccaccgatgccaccagccaaagcctagcttccatcctcaacaacccccac
gccgtcaaatccggcctctacgacccctcctcctggtcaggctggtggtcttcctccgcc
gccgccactcccctcgacttcgcacctctctcctccacctccaaggccgccgcctccgtc
cccgaccccaccagatccgatttccaaccctacctgtcgtcgatttccggaccccacggc
agattcaaggacattcggaaccacagcaacaaagagagcagcgtcgacgattctgctgca
gaggggaagagcagcagcggatttggtcaaggggaagcgttggtggcttgtttgcgcgag
gtgcccgcgttgtacttcaaggaagacttcgcgttggaggagggacccacgttccgggcg
gcgtgcccattctccaccgtgtcggagaatctgggtttgcaggagaagctgtcgcagtac
ttggacgtggtggagctgcacttggtgaaagagatttccttgcggtccaactcgtttttc
gaggcgcagggtcagttggaggatttgaatgtcaagattgccgaggggtgtagccgaatc
cgagaactcaaggagactataaggctcttggattctgatttggtggattcggctcgggag
attcaggatttgaattcgacgaggagtaatttgttggctctgcagctgaaattgaggctg
atattatatgtcaaccaagctctttcggctcttaacctgcttgtttcatccgcagattgt
gctggagcattagacgtcacagatgatttgcagcatttgctggatggtaatgagttgact
ggtctacactgctttcgtcatcttcgggatcatgtagcagcttcaatggatgccataaat
agcattctttcagcagattttatgcgtacatctatacatgatgctggcaatatggatgca
gcaataatgtcaagagcaaaggcaagcctacctatgaatggtgaagtagatgaagttcat
atagatgaagaagaaacctccagttttcaagatcgacttctaccacttgtaattggtttg
ctaagaacggcaaaactcccctctgttttgagaatataccgtgatacacttactgctgat
atgaaaaatgccattaagactgcagttgcagacctcctacctcttcttcttgcccaacct
ttggagtcagatcttgcaccaggagaacgagttgtggatgcggatggcggaggctcatca
cttgcaagcaaattaagaatcatgccacctgaaaacttcgttcaacttctgactgctatt
ttaagaattgttaaggcacatctagttcgggctgctgaagtaaagaaggccattgagtgg
attatgtgcaatattggtggccattatgctgctgattcagttgctgctgcaattgcaatt
ggtgcagtggctgcagatgcatctcaagaaactgatggtcaagctggttctgttctgaca
tattctccacagaggaacgctgccaggatgccttcattgcagggaattccaaatgatgca
tcaggtccatcaaatatgtcaaagaatttcagggctgacgttttgcgtgaaaacacagaa
gctgtgtttgcagcttgtgacgctgctcatggaagatgggcaaagctacttggggttcgt
gcccttcttcatcctaagttgagactgcaggagttcttaaacatatataatatcactcaa
gattttataattgctactgagaagattggtggaaggttgggatatagcactcgaggaaca
ctgcagtcacaggccaaagcttttgttgattaccagcacgagaccagaatgacatatatc
aaggcagtactagatcaagaaacttgggttgaagtagatgttcctgatgagtttcaggcc
attcttacttctctgttctgttcaaattcaaatgggaatgtggatgatggtcaaggtgaa
gttgcaacatgttacactgaagtggcctcgagcaacgaagatactagacttccaaattct
cagcagcatattgcgcacactgattatattgaagcatctgcagatagttctggacaggtg
aaatctttggcggtggctgggacaattgacaacaatatttctgatgttacaacttctccg
gctcagagcaatagtactagcaatgaagaacgccgaagagcttccttgcaaacactttca
ttcaggggtgttgattatcacatggtaaactgtggcttaatgttgctgaagcttttatca
gagtacattgacatgaataataaattgccaatgatgtcttcagaagttgttcatcgtgtt
tttgaaatcttgaagtttttcaatacaagaacctgtcagcttgttcttggtgcaggtgcc
atgcaggtgtctggtttgcgatctattacttcgaagcacttggcgctggctagtcaggtt
gtcagttttacacatgctattattcctgaaatcaggaatattctgttcagtaaagtacca
gagacacgaaaggcattactactgtcggagattgatcgggtagcacaggattataaagtc
cacagagatgagatacattcgaaattggttcaaataatgcgagaaaggttgttggttcat
ctccgtagtttaccacaaattgttgaaggctggaacaggctagaagaatctgattcacag
cctagtcagtttgctcggtccctcaccaaggaagttgggtatcttcaacgtgtcttgtct
cgaactttgcatgaggtagatgttcaagcaattttcaggcaagttgttgtaatcttccac
tcacaaatttcagaagcgttttccaacatagattatagcagtcaacaagcaaaaaacagg
ctgtaccgggatattcagcacatccttggatgcatccgatcattgccttctgataatcca
agcggagcagatatcccgaactggggccaacttgatgagttcctggcacaaagatttggt
cctgacgctggttaa
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