Rhododendron vialii: 131313068
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Entry
131313068 CDS
T09330
Name
(RefSeq) structural maintenance of chromosomes protein 1 isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131313068
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
131313068
Meiosis-specific proteins
Cohesin complex and associated proteins
131313068
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
ABC_tran
IFT57
TMF_TATA_bd
SbcC_Walker_B
DUF948
Motif
Other DBs
NCBI-GeneID:
131313068
NCBI-ProteinID:
XP_058197123
LinkDB
All DBs
Position
13a:complement(3686065..3698784)
Genome browser
AA seq
1240 aa
AA seq
DB search
MPSLSSPGKILRLELENFKSYKGLQTIGPFFNFTAIIGPNGSGKSNLMDAISFVLGVRTG
QLRGSQLKDLIYAFDDKEKEQRGRRAFVRLVYQLGSGAELQFTRSIAGTGGSEYRIDGRV
VNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPRELTALIEQISGSDELKGDYEKL
EEEKARAEEKSTLVYQKKRTIVSERKQKKEQKEEAEKHLRLQDQLKTLKKDHFLWQLWNI
ANDIEKAEEDADAEKRSQQELVQELSDYEHECSIKKKEQAKYLKEIVQCEKKIAEKNSRL
DKNQPEVVKLKEETTRISNKIRSSGKDLKKKKEERRKHADEIKKMQNDLNDLTRQLDELH
EKAQDGGEKLQLADSQIGEYHRIKDKAGTETSKLRDEKEVQDRQQHTDIEAQKNLEENLQ
QLESRNLELELQEEQMQAKLKKIVDTVVKRKEELTQVRKEQREMKDKLGNSRRKYDMLKA
KIGEVENQLRELKADRYENERDAKSAEAVEALKSLFPGVHGRMTDLCRPTQKKYNLAVTV
AMGKFMDAVVVEDELTGKECIQYLKDRRLPPQTFIPLQSVRVKPIIEKLRTLRGTAKLVF
DVIQFDPALEKAILFAVGNTLVCDDLDEAKALSWSGERFKVVTVDGTLLTKAGTMTGGTS
GGMEARSHKWDDKKIEGMKNNYQFLKALLHLHNVFAVAGLKKTKEGFELELEELGSIREM
QLKESEASVKISGLEKKIQYAEIEKKSINDKLERLKQDKENIEKEIHRISPELHKLKNAT
TKRASKISSLEKQINDKVDRIYKNFSESVGVKNIREYEENQLKAAQQMDEERFSLRNQQS
KLKYQLEYEQKRDMDSPITKLESSLGALTSDLNEVKAKEEELKSAMKKATDDIDHLKEEV
KEWKSKSEECEKDIQEWRKKISIATTSLAKHSRQLKSKEAQIEQLKSQKQEIFEKCELEG
IVLPTISDPMDTGSPTSDPALDFSQLSRSYLQNTRPSQREKLDVEFTQKIGALISEIERT
APNLKALDQYEALLEKERVATEEFEAARKEEKEVADKYNSVKQRRYELFMEAFKHISSNI
DKIYNQLTKSTTHQLGGIAYLNLDNEDEPFLHGIKYSAMPPTKRFREMEQLSGGEKTVAA
LALLFSIHSYRPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGSRGNQDIEGGSGFQSI
VISLKDSFYDKAEALVGVYRDSERSCSRTLTFDLTKYRES
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccctctcctctccgggcaaaatcctccgcctggagctcgagaacttcaagtcc
tacaagggcctccagaccatcggccccttcttcaacttcaccgccatcatcggccccaat
ggctcaggcaagtccaacctcatggacgccatcagcttcgtcctcggcgtccgcacgggc
cagctcaggggatcccagttgaaggacctgatctatgccttcgacgacaaggagaaggag
cagcgggggaggcgcgcgttcgtcaggctcgtgtaccagctgggcagtggggccgagctc
cagttcacgaggagcatcgcgggcacgggagggagcgagtacaggatcgacgggagggtc
gtgaattgggacgagtataatgccaagctgaggtcgctggggatccttgtcaaggctcgc
aatttcctcgtttttcagggcgatgtcgagtcaattgcatctaaaaatcctagagaactt
actgcacttattgagcaaatatctggatctgatgaacttaagggagattatgagaaactg
gaagaagaaaaagccagagctgaagaaaaatccacacttgtttatcagaaaaaaagaact
attgtgtcagagaggaagcagaagaaagaacagaaggaagaggccgaaaaacacctccgc
ttgcaagaccaactgaaaacattgaagaaggaccactttttgtggcaactgtggaatata
gctaatgacatagagaaagctgaagaggacgctgatgctgaaaagagaagccagcaagaa
cttgtgcaggaactatcggattatgaacatgaatgcagcattaagaagaaagaacaggca
aaatatttaaaagagattgtgcaatgtgaaaagaagattgctgagaaaaatagtagactt
gacaagaatcaacctgaggttgtaaaactcaaggaggaaacgactcgaatcagcaacaaa
atccgaagtagtgggaaggatctcaagaaaaagaaagaagaaaggaggaagcatgcagat
gaaataaaaaagatgcagaatgacttaaacgatctgactagacaacttgatgagctacat
gaaaaagctcaggatggtggtgagaaacttcagctggctgacagtcaaataggggaatac
catcgaatcaaggataaggctggtacggaaacctcaaagctaagagatgagaaagaggtt
caagataggcaacaacatactgacattgaagctcaaaagaatttggaagaaaatcttcaa
cagctggaaagtcggaatctagagctggagttgcaggaggaacagatgcaagcaaaacta
aaaaagattgttgatactgttgtgaaacgaaaagaagaactcacacaagtgagaaaggaa
cagcgtgagatgaaagataaacttggaaattcaagacgcaaatatgacatgttgaaggcc
aaaattggcgaagttgaaaaccaactacgtgaactgaaggctgatagatatgaaaatgag
agggatgccaagtcagctgaagctgtggaggctctcaagagcctgtttcctggcgttcat
ggtcgcatgactgatctttgtaggccaacccagaagaagtataaccttgctgtcactgtg
gctatgggtaaatttatggatgcagtagtagttgaggatgagcttacaggaaaggaatgc
atccagtatttgaaagatcggaggcttcctcctcagacttttataccccttcagtcagtt
cgtgttaagccaataattgagaagctgcgcaccttgcgcggcactgcgaagctggtcttc
gacgtcatccaatttgatccagccttggagaaggctattttgtttgctgttgggaatacc
ttagtctgtgatgatcttgatgaagcaaaggctctgagttggagtggggagcggtttaaa
gttgtgactgttgatgggactcttttgacgaaggctgggacaatgactggtggtacaagt
ggtggaatggaagcaaggtcacataaatgggatgataaaaaaattgaaggtatgaagaat
aattatcaatttttaaaagctttattgcatttacataatgtcttcgctgttgcaggactt
aaaaagacgaaagagggttttgagttggaattggaagagctcggttcaataagagaaatg
cagctgaaagagtctgaagcatcagtaaagattagtgggcttgaaaagaagattcagtat
gcggagatcgagaagaaaagtatcaatgacaaacttgaaagattgaagcaggacaaggag
aatattgaaaaagaaattcatcgcattagccctgaacttcataagttgaaaaatgctact
actaaaagggcttcaaaaatatcatcattagagaagcagatcaatgataaggttgaccgg
atttacaagaattttagtgagtctgttggggtgaaaaatattcgtgagtatgaagaaaac
cagctcaaggctgctcaacagatggatgaagaaaggttcagcttgagaaatcagcaatca
aagttgaagtaccagttggagtatgagcaaaagcgagacatggattctccaattacgaag
ttggaatcttctctcggtgctctaacaagtgatttaaacgaggttaaggccaaagaggaa
gaacttaaatcagcgatgaagaaagctactgatgacattgatcatttgaaggaggaagtg
aaggaatggaagtccaagtcagaagagtgtgagaaggatatccaggaatggaggaaaaag
atttctattgctacgacaagcttagccaaacacagtcgtcaattgaaatcaaaggaggca
cagatcgagcagctcaagtcacagaagcaagagatttttgagaagtgtgaactggagggc
atagtccttcctactatctctgacccgatggatacaggatcacctacatcggacccagct
cttgattttagtcaattaagtagatcttatcttcagaacacgaggccttctcagagggag
aagcttgatgtggaatttacgcaaaaaattggtgccctaatatcagaaattgaacggaca
gctccaaatctgaaggccttggaccaatacgaggctttgctggagaaggaaagagttgcg
accgaggagttcgaagctgccaggaaagaagaaaaagaagtagctgacaagtataattca
gtgaaacagaggaggtacgaattgtttatggaagctttcaaacatatttctagtaatata
gacaaaatctacaatcaacttacgaagagtaccacacaccagcttggtgggatagcatat
ttgaacttggacaacgaggatgagccgttcttacatggaatcaagtactcagctatgccc
ccaacaaagcgcttccgtgaaatggaacagctatctggtggggagaagactgttgcagca
cttgcattactgttctctatccacagttatagaccatcaccattctttatattggatgaa
gtggatgctgcattagacaatttgaatgttgctaaggttgctggattcattcgatcaaag
tcatgtgaaggatctcggggtaatcaagacattgagggtggaagcgggtttcagagtata
gtgatatccctcaaagatagtttttatgacaaggctgaagcgttggttggagtctatagg
gattctgagcgaagttgctctagaacactgacatttgacctgacaaagtaccgggagtca
tga
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