KEGG   Rhododendron vialii: 131313171
Entry
131313171         CDS       T09330                                 
Name
(RefSeq) UBP1-associated protein 2C-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rvl  Rhododendron vialii
Pathway
rvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131313171
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rvl03019]
    131313171
   03041 Spliceosome [BR:rvl03041]
    131313171
Messenger RNA biogenesis [BR:rvl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     131313171
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     131313171
Spliceosome [BR:rvl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    131313171
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 131313171
NCBI-ProteinID: XP_058197301
LinkDB
Position
13a:complement(28122543..28132394)
AA seq 403 aa
MELSKKRRADENGATLFTPFETDTAPPPLPNPNLTLDDARKIILPFTQPQLLDILEPALL
RHPDVLAAVRSIADADPARRKLFVRGLGWETTTEKLRNLFSTYGDVEEAVVITDKATGKS
KGYGFVTFRHVDGALVALKEPSKKIDGRMTVTQLAAAGISGANAGVGGVDVSLRKIFVGN
VPFEISSERLLGHFSAYGEVEEGPLGFDKQMGKERGFAFFVYKTEEGARASLVDPAKNID
GHQVMCKLAEDGKRRKPSGDVGAGVPPVGSVGPGSLNSGYGVPGGGPGGYGGFSGGLPHQ
NANVNPGFGNQGQSSFVGAGGGYGPGLGGGGGYGGSQYGVSGSGEYGGYRLPPSSIGMPS
GGYAESGNYGLSTSSFPTQLPQPSSGPRFPPGGMYQGGMQPYY
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggaactttcgaagaaacgcagagccgacgagaacggcgccacattattcacccccttc
gagaccgacaccgctcctcctcccctcccaaaccccaacctcaccctcgacgacgcccgc
aagatcatcttgcccttcacgcagccccagctcctcgacatcctcgagcccgccctcctc
cgccaccccgacgtcctcgccgccgtccgctccatcgccgacgccgacccggccaggcgc
aagctcttcgtccgcggtctcggctgggagaccaccaccgagaagctccgcaacctcttc
tccacctatggcgacgtcgaggaggccgtggtcatcaccgataaggccactgggaagtcg
aaaggctacggctttgttaccttcaggcacgttgatggtgcattagtggccttgaaggag
cccagcaagaaaatcgacggccggatgactgtgacgcagcttgcggccgccggaatttca
ggtgctaatgcaggggttggtggtgttgatgtttctttgaggaagatttttgttggtaat
gtgccgtttgagatttcgtcggagaggttgttggggcacttctctgcatacggagaggta
gaggaagggcctttagggttcgataagcagatgggtaaggagagggggtttgcgttcttt
gtttacaagacggaggagggggctagggcttcgcttgtggatccggctaagaacattgat
gggcaccaagtgatgtgtaaattggctgaagatgggaagaggaggaagcccagtggtgat
gttggggctggtgtgccgccagttgggtcggtggggccgggttcactgaattctggttat
ggtgtgcctggtggtggccctggtggatatggaggcttctctggtggactgccccatcaa
aatgcaaatgtcaatccgggatttgggaatcagggacagtcttcgtttgttggtgctggt
ggcgggtatggacctggtttgggcggaggtggtggttatggtggttcacaatatggtgtg
tctggttcaggtgaatatggtggatataggttgcccccaagctctattgggatgccttct
gggggatacgcagagagcggtaactatgggttgtcaacatcttcttttccaacgcagttg
ccccaaccatcgtcgggtcctagatttcctcctggtggaatgtaccagggcggcatgcaa
ccctactattga

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