KEGG   Rhododendron vialii: 131313261
Entry
131313261         CDS       T09330                                 
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
rvl  Rhododendron vialii
Pathway
rvl03420  Nucleotide excision repair
rvl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    131313261
  09124 Replication and repair
   03420 Nucleotide excision repair
    131313261
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rvl04121]
    131313261
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131313261
Ubiquitin system [BR:rvl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     131313261
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      131313261
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      131313261
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_EML Beta_propel
Other DBs
NCBI-GeneID: 131313261
NCBI-ProteinID: XP_058197456
LinkDB
Position
13a:14629586..14651533
AA seq 1089 aa
MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIVAKCTRIEIHLLSPQGLQPMLDVPIYG
RIATLELFRPHGEAQDLLFIATERYKFCVLQWDPDAAEVITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCPRPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SASAFKAIPIRPSITRAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAVVYVGSSYGDSQLIKLNLHPDAKGSYVEVLESYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRAATDDPYDTFLVVS
FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLLQVTSSSVRLVSSISRELR
HEWLAPSGFSINVATANATQVLLATGGGHLVYLEIGDGTVTEVKHAQLEYEVSCLDMNPI
GENPNYSQLAAVGMWTDISVIIFSIPDLNRVTKENLGGEIIPRSVLLCSFEGISYLLCAL
GDGHLLNFLLNMSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQTRTFAICSLKYNQSSTEEADMHFIRLLDDQTFEFISTYALDQYEYACSILSCSFSDD
GNVYYCVGTAYVMPEENEPSKGRIIVFAVEDQKLVLIAEKETKGAVYSLNAFNGKLLAAI
NQKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGGENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHDQYQFFEKLQSNLRKV
IKGVGGLSHEQWRSFYNEKKTSDAKNFLDGDLIESFLDLGRARTEEISKAMNVPVEELMK
RVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagtatatggaactacgtcgtgacggctcacaagccgaccaacgtcacccactcgtgc
gtcggcaatttcaccagccctcaggaactcaatctcatcgtcgcgaaatgcactcgtatt
gagattcatctgcttagtcctcagggtttgcagcctatgttggatgtgccaatatatggt
agaattgcgacgcttgaactttttcgccctcatggtgaagcacaagatctcctgttcatt
gcaacagaaagatataaattctgtgttcttcagtgggatcctgacgctgctgaggttatc
acaagagcaatgggggatgtgtcagatcgcataggtcgtcctacggataatggtcagatt
ggcataattgatcctgattgcagactaattggtctacatctgtatgatggattatttaag
gttattccatttgataataaagggcagcttaaggaagcattcaacatcagacttgaggag
ctacaggttttggatatcaaatttctctatggttgcccacgacctactattgttgttctc
taccaggataacaaggacgctcgtcatgtcaaaacatatgaggttgctctgaaggataaa
gattttgtcgagggtccatggtctcagaataatcttgataatggagcagacttgctaatt
ccagtacccccgcctttgtgtggtgttctaattattggagaagaaacaattgtatactgc
agtgcctctgcatttaaagcaatcccaattcgaccttcgatcacaagagcatatggaagg
gttgatgctgatggttctagatacttgcttggtgaccatgcagggcttcttcacctttta
gtaataacccatgagaaagaaaaagttactggactaaaaattgagctcttgggagaaact
tctattgcatctaccatatcatatcttgataatgctgttgtatatgtcggctcaagctat
ggagattcacagctcataaagctaaatctccatccagatgcaaaagggtcctatgtggaa
gttttagaaagctatgtcaatttggggccaattgttgacttttgtgtggttgacctggag
aggcaaggtcaaggtcaggtcgtaacttgctctggagcctacaaagatgggtctctgcgg
atagttcgaaatggaattggaatcaatgaacaggcatcggtagaacttcaaggcatcaaa
ggtatgtggtcactaagagcagctactgatgatccatatgacaccttcttggttgtcagt
tttattagtgaaacacggattttggcgatgaatcttgaggatgagttggaggaaaccgag
atagagggtttttgttcccaagtccagactttgttctgtcatgatgctgtgcacaatcaa
cttttacaggttacttcaagctctgtaagactggtcagttctatctctagagagctgcga
catgaatggcttgctccatcaggcttttcgatcaatgttgctactgccaatgccacccag
gttttattggctactggtggtggccatttagtttacctagaaattggtgatgggacagtg
acagaagtgaaacacgcacaactggagtatgaggtctcatgccttgatatgaatcccatc
ggtgaaaatccgaactatagtcagctagctgctgttggaatgtggaccgatataagtgtt
atcatattttctattcctgacctgaaccgcgttacaaaggagaatttgggaggggagata
attcctcgctctgttcttttatgttcatttgaagggatatcttatttgctatgtgcgcta
ggggatggtcatctcttaaactttctattgaacatgagcactggggagttaacagatagg
aaaaaggtgtcccttggtacccagcctataacactccgcactttctcgtcaaagaatacc
acacacgtcttcgctgcatcagataggcctactgtcatttacagcagtaacaagaagtta
ctttacagcaacgtaaatctgaaagaagtcagtcacatgtgccctttcaattcggctgct
ttcccagacagtcttgcaattgcaaaagaaggagagctgacaattggcaccattgatgat
atccagaaacttcatatccgctccatcccccttggggagcatgcacgccgtatttgccat
caagagcagactaggacctttgcaatatgtagtttgaagtataaccaatcaagtacggaa
gaggctgacatgcactttattcgtttgctagatgaccagacctttgagttcatctcaact
tacgcacttgaccaatacgagtatgcctgctccatacttagttgctccttttctgatgat
ggtaatgtgtattactgtgtggggacagcttatgttatgcctgaggagaacgagccatcc
aagggtcggataattgtattcgcagttgaagatcagaagttagtgcttattgcagagaag
gaaactaaaggggctgtctattctcttaatgcctttaatggaaagctgctcgctgctatc
aatcaaaagattcagttgtacaagtggatgctccgggacgatggcacccgagaattgcaa
tcggaatgcggacatcatggacacatacttgccctttatgttcaaactcgtggagatttc
attgtcgttggtgatctaatgaaatctatctccttgttaatctataagcacgaggagggt
gctatcgaggaaagagcgcgagattacaacgcgaattggatgtcagcggttgaaattctc
gatgatgacatttaccttggcggcgagaacaacttcaacctcttcaccgtcagaaagaac
agcgagggggccaccgatgaggagcggggccgcctcgaggtggtgggcgagtaccacctt
ggagaatttgtcaaccgcttcagacacggatctctcgtcatgcgccttccagattccgac
gtgggccagatcccaactgtaatatttgggacagttaatggggtaattggcgtcattgcc
tctctgcctcatgatcagtaccaattctttgagaagttacagtccaacttgaggaaagtg
ataaagggcgtgggagggttgagtcacgagcagtggaggtcgttttacaatgagaagaaa
acatcggatgccaagaatttcttggatggagatctcatcgaatcattccttgatcttggg
cgggcccgcaccgaggagatttccaaggcaatgaatgttccggtggaggagcttatgaag
agagtggaagagttgacaaggttgcactag

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