Rhododendron vialii: 131313336
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Entry
131313336 CDS
T09330
Name
(RefSeq) transcription initiation factor TFIID subunit 11 isoform X1
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
rvl
Rhododendron vialii
Pathway
rvl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131313336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131313336
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131313336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
DUF3246
Motif
Other DBs
NCBI-GeneID:
131313336
NCBI-ProteinID:
XP_058197580
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All DBs
Position
13a:19612830..19617654
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AA seq
324 aa
AA seq
DB search
MCTSLVPALYALTSHDDYSYTPSPAIGHLTPGTTQRRPPERASSMKQSKDPFEVAFEEED
EEYDSPTDSPVVAPDNVIGPQTETHRINLQTSTTSQSEPAALQLPVDVHNNTTTQDDYDD
DDDYDNEIDTITPRPPTNTNTAKPLKSTAAAASLARKAKEDEEEEEEEENMDVELGNPST
SDPDKMSKMQAILSQFTEEQMSRYESFRRSGFQKSNMKRLLASITGSAKISIPMTIVVSG
IAKLFVGELVEAARIVMSERNESGPIRPCHMREAYRRLKLEGKVPKRSVPRLFSSNLKIR
ITTRRGQLHLVLFRQRGKHLRCHY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacctctctagttcccgcactctatgccctaacttcacacgacgattacagctac
acccccagcccggcgatcggacacctgacgccggggacaacccaacgccgtccaccggag
agagcgagcagtatgaaacagtcgaaggatccattcgaagttgcgtttgaggaagaagac
gaggagtatgattcgccaactgattcccccgttgttgctcctgataatgtgatcggacct
caaaccgaaactcatagaataaatctccagactagtactactagtcaatcagaacctgct
gctttacagctccctgttgatgtccataataatactactactcaggacgattacgacgac
gatgacgattacgacaacgagatcgatactattactccccgtcctcctacgaatacaaat
actgcaaagccattgaaatccacagctgctgctgcatcgttggccaggaaggccaaagag
gacgaggaggaagaagaggaggaggagaacatggacgttgagctcgggaacccttccacc
tctgaccctgataagatgtctaagatgcaggctattttatctcagttcactgaagaacag
atgagtagatatgaatcattccggagatcaggatttcagaaatcaaacatgaaaagattg
ttagcaagcattactggtagtgcaaaaatttccataccaatgacaattgtggtgtcaggg
atagcaaaactgttcgttggtgaacttgttgaagcagccagaattgtgatgtccgagaga
aatgagagcgggccaatcaggccctgccacatgagggaagcctatagaagattaaaactt
gaaggcaaggttccaaaaagatcagttcctaggcttttcagttctaatttgaagattcgc
atcacaactaggaggggacagcttcatctggtgttgttcaggcaaaggggaaagcatctc
cgctgccactattga
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