KEGG   Rhododendron vialii: 131313355
Entry
131313355         CDS       T09330                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4-like isoform X1
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
rvl  Rhododendron vialii
Pathway
rvl03020  RNA polymerase
rvl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131313355
  09124 Replication and repair
   03420 Nucleotide excision repair
    131313355
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rvl03021]
    131313355
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131313355
Transcription machinery [BR:rvl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     131313355
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131313355
SSDB
Motif
Pfam: RNA_pol_Rpb4 CARD
Other DBs
NCBI-GeneID: 131313355
NCBI-ProteinID: XP_058197607
LinkDB
Position
13a:complement(19965070..19970674)
AA seq 225 aa
MAEKGGKGFSLPKSSLKSPAHLKGKDDSPAKSKNGRKVQFDSEDSLESEINLSSKAGGKG
DTPFGKGDWGKGGKGDKFANGGKSSMPKGSSTSGQKNEQELPKNAKCLMDCEAADILQGI
QEQMVVLSEDPTIKIPIPFDRGLQYAKNGSRYTDPESVRRVLEPLKAHGVSDNEICMIAN
ICPESLDEVFALISSLKGKKNKVTQPLKDALSELTKLKQSTRSSN
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcagagaaaggaggaaaagggttctccctgcccaagtcttctctcaaatctcccgct
catttgaaagggaaggatgatagcccagcaaagtcaaagaatgggcgaaaagttcagttt
gattctgaagattcactagaatccgaaatcaacctgtcgtcaaaagctggtgggaagggt
gataccccttttggtaaaggtgattggggaaaaggggggaaaggagacaagtttgcaaat
ggtggcaagagctcaatgccaaaaggatcttccacttccgggcaaaaaaatgagcaggaa
cttccaaagaacgccaaatgtctgatggactgtgaagcagcagatattttacaaggaatc
caggagcaaatggttgtactatctgaagatccaacaattaaaatcccaataccatttgat
aggggcctccagtatgctaagaatggtagccgttatacagaccctgaatctgttcgacga
gtgcttgagcctctcaaagcgcatggtgtttctgacaacgagatatgcatgattgccaac
atatgtccagagtctttggatgaagtttttgctctaatctcatccttgaagggtaagaaa
aacaaggtgacacaacccctcaaagatgcattgagtgaattaactaaacttaagcaatcg
acacgaagttccaactga

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