Rhododendron vialii: 131313362
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Entry
131313362 CDS
T09330
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
rvl
Rhododendron vialii
Pathway
rvl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131313362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131313362
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
131313362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
131313362
NCBI-ProteinID:
XP_058197625
LinkDB
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Position
2a:15905803..15923110
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AA seq
548 aa
AA seq
DB search
MSFDLLLKPSCSGCGSSKDLYGSNCKHLTLCLSCGKTMAENHAKCYECGATITRLIREYN
VRACSSNDKNYFIGRFVTGLPSFSKKQSAENKWSIQKEGLQGRQVTDALREKYKNKPWLL
EDETGQFQYHGQLEGAQSATYYLLMLQGKEFAAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRRKTADGYQRWMMKAANNGAAAFGEVEKFDDKESGAGGGRGRRKTSGDEEENNASDRG
EEDEEEEEARKSRLGLNKRSGDDDEEGPRGGDLDMDDDDAEKGDDWEHEEIFTDDDEAVA
IDPEEREDLAPEIPAPPEIKQDEEDEDETNEEEEGGLSKSGKELKKLLGRTGGLDDSDAE
DDDDDDDIEDDTSPVLAPKQKDAPKEEPVDNSPLKQASSGSARGTPTTSKSKGKRKTNGD
DVKASNNGAPPKKVKTENDVKPSKEEITLTSKSSVPTKVAAPSSSKMSTPSSSSASKIAS
TASSGPVTEDEIRAVLMQKTPVTTQDLVAKFKSRLKTKEDKDAFAAILRRISKIQKTNGP
NYVVLRDK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgatttgctgctgaagccgtcgtgcagcggctgcggatcgtccaaggatcta
tacggaagcaactgcaagcacttgactctctgcttgtcatgcggcaaaacaatggccgag
aaccatgctaaatgctacgagtgtggcgccaccatcacccgattgattcgggaatacaat
gttcgggcatgttctagcaacgacaagaactacttcattggtaggtttgtgacaggtcta
ccaagtttttcaaagaagcagagtgctgagaataagtggtctatccagaaagaaggactt
cagggtcgtcaagtgactgatgctttgcgggagaagtacaagaataaaccttggctattg
gaggatgaaactggccaatttcagtaccatggtcagcttgagggtgcacaatcagcaacc
tactacctactaatgctgcagggaaaggagtttgctgctattcctgcaggctcttggtat
aacttcaataaagttgcacaatataagcaacttaccttggaggaagcagaagagaaaatg
aagaacagaaggaaaactgcagatgggtatcaaagatggatgatgaaagcagcaaacaat
ggagctgctgcatttggtgaagttgagaagtttgatgataaggagagcggagctggtggt
ggaaggggacgtaggaaaaccagtggtgatgaggaggagaacaatgcttcagatagggga
gaggaagacgaagaagaggaggaggcgaggaaaagtagacttggactgaacaaaagaagt
ggcgatgatgacgaagaaggtccaagaggaggtgaccttgatatggatgatgatgatgct
gagaagggtgacgattgggagcatgaagaaattttcaccgatgatgatgaagctgttgct
attgatcctgaggaacgagaagacttagcccctgaaatcccagcacctccggaaattaag
caggatgaagaggatgaggacgaaactaatgaagaggaggaaggaggcctgagcaaatct
ggaaaagagttgaagaagctgcttgggcgaactggtggtttggatgattcagatgcagag
gatgacgacgacgatgatgatatagaggatgatacttcacctgtgctggctcccaagcag
aaggatgctccgaaagaagaacctgttgataacagtcctttaaaacaagcttcctcggga
tctgctcggggcaccccaaccacgtccaagtcaaagggaaagaggaaaacaaacggcgat
gatgtaaaagctagtaataatggtgcacctccgaaaaaagtgaagacagaaaatgatgtg
aaaccttcgaaagaagaaattacacttacttcaaaaagcagtgtacctacaaaagttgca
gcgccatcatcttccaaaatgtctactccatcatcttcaagtgcatcaaaaattgcgtcc
actgcatcatctggacctgtcacagaagatgaaatccgggcagttctaatgcaaaagact
cctgtgaccacacaggatctagttgctaaatttaaatcaagattgaaaaccaaagaggat
aaggatgcttttgcagctatactgaggagaatttccaaaatacagaaaaccaatgggcct
aactacgttgtgttgagagataaatga
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