KEGG   Rhododendron vialii: 131313455
Entry
131313455         CDS       T09330                                 
Name
(RefSeq) protein SPA1-RELATED 2
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
rvl  Rhododendron vialii
Pathway
rvl04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    131313455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rvl04121]
    131313455
Ubiquitin system [BR:rvl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    131313455
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 Beta-prop_TEP1_C EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Pkinase ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N WD40_like Beta-prop_DCAF12 WD40_RFWD3
Other DBs
NCBI-GeneID: 131313455
NCBI-ProteinID: XP_058197754
LinkDB
Position
2a:complement(45616011..45625538)
AA seq 1052 aa
MDEGLGDEAAGVDSVDGKCLLGKDVMTGSHGMATLNEGQYHHGSSPGFAAVLEGKNRDIG
GDSQHPYDSPHCTEDAGVMVEELTLRNYNGENLAIVGTSKSSEILQTWKNQWQHLYQIGS
GVSRGDTLLKDNGQSSSNAWEDVGYTVFSELIRQKPPDDAQNVEHSPNDENKAVASSMSP
PPGGIRTKILSNSGFSEYFVKNTLKGKGVVLKGPTREGFGAEIKGPTNPKAVSTAKVAFD
APLSSSAKTVVSLASGAGRGVGPSLNAVNGGVNLREWMKARHYEANKVARLYIFRQIVDF
VDFSHSQGVALQDLRPSFFKLLPSNQVIYLGSTVHQDTALNLTDQDNLFSENDRDKKRLP
EQALHPAVSQMVKKQKFGENLNLNKRWSQFSSRSGFKAATATDTGLSVVLPQDSWDDLNV
QHNLKREHKSEGNSSSPHGSNELQLRSTCTSDPLEEKWYASPEELNGRGCTFSSNIYVLG
VLLFELLGLFDSERARTAAMSDLHHRILPPNFLSENPREAGFCLWLLHPEPSSRPSAREV
LQSGVISGIVESYGDELSSSLSEDDTESDLLLHFLLALKEEKQKDALKLVEEIKCLETDI
EEVEIRQPKQPLVLSGSPSKPLHSRGNRFQYGEHSSFELHSKLTSGANSEMRLMKNISQL
ESAYFSTRSSIQLSESAAATRTNKELLEDRDGDYPAPKDEKRKKPMDRLGAFFGGLCKYA
RYSKFEVHGVLRNGDLQNSANVICSLSFDRDQEYFAAAGVSKRIKIYDFQALFNKAVDIH
YPAIEMSNKSRLSCICWNSYIRNYLASTDYDGIVKLWDAGTGQGFSQYIEHSKRAWSVDF
SQVDPKKLASGSDDCSVKLWNINERNSLCTIRNIANICCVQFSPYSSHLLAFGSADYKTY
CYDLRNVSTPWCILDEHDKAVSFVKFLDSETLVSASTDNTLKLWDLNKTSSTDLSATSIL
TLKGHTNEKNFVGLSVADGYIACGSETNEVYAYYRSLPMPITSYKFGSIDSISGKETDDN
NGLFVSSVCWKKNSDMLVAANSTGCIKVLQMV
NT seq 3159 nt   +upstreamnt  +downstreamnt
atggatgaaggattgggcgacgaagcagctggagttgactctgttgatggaaaatgtctt
ctaggcaaagatgttatgacgggatctcatggaatggcgacactcaatgagggtcaatat
caccatggctcatccccgggatttgcagctgttttagagggtaagaaccgagatataggc
ggtgactcacaacatccatatgatagtcctcattgtacagaggatgctggggtcatggtt
gaagagttaacactgagaaattataatggtgaaaacttagctatagtgggtacttccaaa
agtagtgagatattgcagacttggaagaatcagtggcaacatttgtatcaaataggaagt
ggtgtctccaggggtgatactcttttgaaggacaatggtcaatcttcgtcaaatgcctgg
gaggatgttggatacacagttttttcagaattgattcgtcaaaaaccaccagatgacgct
caaaacgtggaacattcaccgaatgatgaaaataaagctgttgcaagcagtatgtcacca
cctcctggaggtatcaggactaaaattctttccaattccgggttttctgagtattttgtc
aaaaatactctgaaaggtaagggggttgtacttaagggtccaactcgtgaaggatttggt
gcggagattaagggcccgactaatccaaaagctgtcagtactgctaaggtagcttttgat
gcaccattgagttcgagtgctaaaacggtcgtgtctcttgcttctggtgctgggcgtggg
gtgggtccttccctcaatgctgtgaatggcggagtcaatttgagagaatggatgaaagcc
aggcactatgaggcaaataaagttgcgaggttgtatatatttaggcagattgtagatttt
gtggatttctctcactctcaaggagttgcattgcaagacttgcggccatcattctttaag
ttgttgccatcaaatcaggttatataccttggatcaactgtccatcaagatactgcattg
aatcttacagatcaggataaccttttctcagagaatgatcgggataagaaaaggctgcca
gaacaggccctgcatcccgctgttagtcaaatggtaaagaagcagaagtttggggagaac
ctgaacttaaacaaacggtggtctcagttttcatcaagatctggctttaaagctgcaact
gctactgatactggtctcagtgttgttttgcctcaggattcctgggatgatttaaacgtt
cagcataacctgaaaagagaacacaaaagtgagggaaactccagcagccctcacgggtct
aatgaactccaactgcggtctacttgtacgagtgatccattggaagagaagtggtatgct
agtcctgaggagcttaatgggaggggatgtacattttcatcgaatatctatgttctgggt
gttcttctctttgagttgcttggcttatttgactctgaaagggcacgtactgctgccatg
tcagatctgcatcataggattcttcctccgaacttcttgtcagagaatcccagagaagct
ggattttgcctttggcttcttcaccctgaaccttcatcacgtccatcagcaagggaagtc
ctgcagtctggtgttataagtggaattgtagaatcgtatggagatgagttgtcatcatct
ttgagtgaagatgatacggaatcagacttattattacattttcttctcgcattgaaagag
gaaaagcagaaggatgccttgaagcttgtagaagaaattaagtgtctcgaaacagatatt
gaagaggtagaaatacggcagccaaaacaaccattagtcctttcaggctcacctagcaag
ccccttcattcaaggggaaacaggtttcaatacggcgaacattcaagtttcgagttgcat
tctaagttaacctccggagctaattctgaaatgaggttgatgaagaacatcagtcaactg
gaaagtgcgtacttctccacaagatccagtattcagctttctgaaagtgctgcggccaca
cgcactaataaggaactattggaagatagagatggagattatccggcaccaaaggatgaa
aagaggaagaagcccatggatcgtttaggagcattctttggcggtttgtgcaagtatgct
cgttatagcaagtttgaagtgcatggggtattaaggaatggagatcttcagaattctgca
aatgtaatctgctctttaagttttgatcgagaccaagagtattttgctgctgctggagta
tctaagaggataaaaatttacgattttcaagcactctttaataaagctgttgatatccat
tatccagctattgagatgtcgaacaaatcaaggctcagctgcatttgctggaatagctat
atcaggaactacctggcttcgactgattacgatggaatagtcaagctatgggatgcagga
actggtcaagggttttctcaatacattgagcacagtaaaagggcttggtctgtggacttt
tcccaagtggatccaaaaaaattagccagtggaagtgatgactgttctgtgaaactttgg
aacattaatgagagaaatagtttatgcacaatcaggaacattgcaaatatctgctgtgtt
cagttctctccttattccagtcatttattagcttttggctctgctgattacaaaacctac
tgctatgatcttcggaatgtttcgaccccctggtgtatactggatgagcatgacaaagct
gttagcttcgtgaagtttttagactctgaaactcttgtttctgcatccactgacaacacg
ctgaagctatgggatctcaataaaactagttccacagatttatcagccactagcatctta
acccttaaaggtcacactaatgagaagaattttgtggggttatctgttgctgatggatac
attgcttgtggttcagagacaaatgaggtgtatgcttattatagatctctgcctatgcca
atcacctcttacaagtttggttccattgattctatttctgggaaggagactgatgataac
aacggactgtttgtttcaagtgtgtgctggaaaaagaactcagacatgcttgttgctgcc
aactccaccgggtgcattaaagtgcttcagatggtttga

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