Rhododendron vialii: 131313564
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Entry
131313564 CDS
T09330
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131313564
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
131313564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_Ribbon_TF
Zn_ribbon_RRN7
DUF4143
Zn_ribbon_3
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-GeneID:
131313564
NCBI-ProteinID:
XP_058197924
LinkDB
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Position
13a:28366963..28369134
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AA seq
530 aa
AA seq
DB search
MASSRPCSSCGERSLADDDDGNSFCASCGAVQDFDNFQHSLGGISGPTGTFVHTGTAGSG
STFNYKETKIYYAKQNIERITSLFDFSPSKKDEVRVMVETVTEGEYGQGDWFPVLIGACA
YVVMRRDNKSLVLVEVGDKVGCDVHELGRMVSRVVQFMRLKLPEFDIVDSFQRAVRTCFV
SLDNEDKVGRMLKQGIFLVQCMVKWYLTTGRRPLPVVVAVLVFVAQLNAVDVRIEDVAME
LHVAVVTCKLRYKELLESLVKVAHVLPWGKDITVKNIVKNAPFVLEYMELKSMSKCGEKR
KVVDHVGFDMDDLVGSCLSEEAEYGLDNHGMENDSQYFKVQDKRSSPRGTRDDLETLKIS
HECLSMMYSEYSNKISNTDYLEECGCKNRRKKGRGFDLLDCREWWKGKSELSRKLLLKKI
LEKDVGLVAMPPSFVAGCLAYQRRREKIKAAKLRITKIMGLQNGDSGDNGNLCISDSVNI
GKKRRRVKVYVDWEDLIIETLLLHQVQEEEIEKGHYNTLLDLYVFNSGSM
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttctcgcccctgttcgagttgcggcgagagatccctcgccgacgacgacgac
ggcaattccttctgcgcctcgtgcggcgctgtccaggacttcgacaacttccagcacagc
ttgggcgggatcagcggccccaccggcaccttcgtccacaccggcaccgccggctccggc
agcacctttaactacaaagagaccaaaatatattacgccaaacaaaacatcgaacgcatc
acctcgttatttgacttttcgccctcgaagaaagacgaggtcagggttatggtagagacc
gttaccgagggggagtacgggcagggggattggtttccggttctcataggcgcctgcgcg
tacgttgtgatgagaagagataacaagtcgttggtgctcgtggaggtcggggataaggta
ggttgcgatgttcacgaactgggtcggatggttagtcgggttgttcagtttatgcgattg
aagttgccggagtttgacatcgtggattcgtttcaacgggcggtccggacatgttttgtt
tcgttggataatgaagataaggttgggaggatgttgaagcaggggattttcttggtccag
tgtatggtgaagtggtacttgaccacggggcggagaccgcttccggtggtcgtggctgtg
ttggttttcgttgctcagttgaatgcagtcgatgttcggattgaggatgtggcaatggag
ttacatgtggcggttgttacgtgcaagctgcggtataaggagcttttagagagtctggtg
aaggttgcgcatgtattgccttggggaaaagatattacagttaagaacattgttaagaat
gcaccgtttgtgttggaatacatggaattgaagtcaatgtccaagtgtggcgagaagagg
aaggttgtagatcatgttgggtttgatatggatgatttggttggaagctgtttgagcgaa
gaagcggaatatgggcttgataatcatggcatggaaaatgattctcaatatttcaaggtg
caagataagcgttcttccccaagagggactagagatgatttggagacgctcaagatatca
catgagtgcttgtcaatgatgtattcagaatattcaaacaaaatttctaataccgattat
cttgaagagtgtggatgtaaaaatagaaggaaaaaagggagagggttcgatcttttagat
tgtagggagtggtggaaaggaaagtcagaactgagcagaaagcttttgctcaagaaaata
ctggaaaaagacgtgggattagttgcaatgccaccatcttttgttgctggatgcttggca
tatcagaggaggagagagaagataaaggctgctaagctacgtattactaagattatgggc
ttgcaaaatggtgattcaggtgacaatggtaacctttgcatatcggacagcgtgaatatt
ggaaagaagcgaaggagagtgaaggtttatgttgattgggaagacttaattattgagacc
cttctccttcatcaggtgcaggaggaggaaatagagaaggggcattacaataccttactg
gatttgtatgtatttaattctgggagtatgtga
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