Rhododendron vialii: 131313593
Help
Entry
131313593 CDS
T09330
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
rvl
Rhododendron vialii
Pathway
rvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131313593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131313593
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131313593
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
131313593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
DUF1248
Motif
Other DBs
NCBI-GeneID:
131313593
NCBI-ProteinID:
XP_058197960
LinkDB
All DBs
Position
13a:complement(2253985..2257239)
Genome browser
AA seq
329 aa
AA seq
DB search
MRGLQVSLNQTQKIRLQRALEKLESFSSKSNPNASVTVADTIPVNYEDGVLKGHGTSELD
GEVVATLCGVVERVNKLVYVRTLRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDAVLM
LSSMNLPDGIQRRRTAVDELNMRSIFEENDVVCAEVRGFQHDGSLHLQARSQKYGKLERG
QLLTVSPYLVKRRKQHFHHIEQYGIDLILGCNGFIWVGEHVEARDDMIVEDQATKSEQQY
ATTSMYPTSLEQEERTYTPLETRQNICRTANAVRVLSTLGFSINVEVIMEMVNLSSSLNL
DIHEMLGAEFCVLVAEGEAERRSLKKKKG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagggggttacaggtatcgttgaatcaaacgcagaagataagacttcagagagctctg
gaaaagctcgagtctttctcctccaagtccaaccctaatgcctccgtcaccgtcgccgat
actatccccgtcaactacgaagacggcgtcctcaagggacacggaacctcagaacttgac
ggcgaagtggttgcgacactctgtggggtggttgaacgtgttaacaagctcgtctacgtt
cgcactttgagggccaggtacaagcccgagatcggggacatcatcgtaggacgtgttatt
gaggttgctccaaagcgatggagattggagataaattttagccaagatgcagttctaatg
ctttcttcaatgaacttacctgatggcattcagaggcggcgaacagcagttgatgagctc
aacatgcgcagcatttttgaagagaacgatgttgtttgtgccgaagttcgtggtttccag
catgatggaagcttgcacctgcaagcaagaagccagaagtatggaaagcttgaaagagga
caattacttacagtctctccttatctagtcaagaggcggaaacaacatttccaccacata
gaacaatacggtattgacctgatacttggctgcaatggattcatctgggttggggaacat
gttgaagctagagatgatatgatagtagaggatcaagctactaaatctgagcaacagtat
gccacaaccagtatgtatccaacgagtctcgaacaagaagaacgaacttacacgccgttg
gagactaggcaaaatatatgcaggactgcaaatgctgttcgtgtcttgtctactttaggc
tttagtattaatgtagaagtgatcatggagatggttaatttgagcagctctttaaatcta
gatatacatgagatgcttggggcagaattctgtgttctggttgccgagggagaggctgaa
aggcggagcttgaagaaaaagaaagggtga
DBGET
integrated database retrieval system
