Rhododendron vialii: 131313661
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Entry
131313661 CDS
T09330
Name
(RefSeq) protein argonaute MEL1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131313661
03036 Chromosome and associated proteins [BR:
rvl03036
]
131313661
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131313661
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131313661
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
131313661
microRNA pathway
RISC loading complex
131313661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF4023
Motif
Other DBs
NCBI-GeneID:
131313661
NCBI-ProteinID:
XP_058198081
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All DBs
Position
13a:complement(12069801..12078592)
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AA seq
969 aa
AA seq
DB search
MSGRGGGRGRGGGRGPPPSTSVGRGRGGPPPVRQPPVPSHYPSPSTTPSPDYPSLPSSST
ASSLAREFDRKLTLPSTPSPSSPAPPPPVPSVQTPAPSQAPQLPVVTAPSSSKSLRPPAR
PGFGRAGRKCVIRANHFLVDVVDKDLHHYDVTITPEVTSKNVCREIISELVTAYRESHLG
KCWPAYDGRKSLYTAGSLPFSSKDFVVKLVDKDRKDRRERKFDVAIKFAGKADLHHLQQF
IGGMQLDAPQETLQVLDVVLRSAPSTNYVVVGRSFFSPSLGDPPGPLGDGLQYWKGFYQS
LRATQMGLSLNVDTSARAFYEPVMVSQFVEGNCNIRDLRRPLSDQDRIRVKKALKNLRVE
PVYRERRKYKISGVSAQPLSQLTFSSDELGAKTSVVQYYRDRYQINLSYPNLPALQAGSD
AKPVYLPMELCKIVPGQRYVKKLNEKQVTAMLRATCQRPPDREQSINKMVGCNNYNNDNL
VKEFGLRVKVEPASIDARVLPPPMLQYLGKQEAPQVGCWNMIDKKMINGGKVAFWTCVSF
SRLRENDVYRFCEELVNMCRNKGMDFNPTPLIPIDSAHPGQIEAALKYIHEQSNAEISKL
GHAGKQLQLLIIILPEVSGSYGTIKRVCETELGIISQCSQPRHAIKCSKQYLENLSLKIN
VKAGGRNTMLYDADPRVKKIDLLTDLVTIIFGADVTHPQPGEDSSPSIAAVVASMDWPQV
TKYRGLVSAQAHREEIISDLYTVTEDPNKGIVHGGMIREQLIAFRRITGHKPDRILFYRD
GVSEGQFSEVLLREVDAIRKACVSLEANYLPRITFVVVQKRHHTRLFPARHGERGSTDRS
GNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENRFPADALQILTNNLC
YTYARCTRSVSVVPPAYYAHLAAFRARYYIEGQMFEGGSSSERGTAERISEVRPLPRIKD
NVKDVMFYC
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtcgcggtggtggccgtggacgcggtggcggacgaggcccacctccgtctact
agcgtcggaagaggccgcggtggacccccgcccgtacgtcaacctcccgtcccttcccat
tacccttcgccttctaccacgccttcacccgactacccctccttgccatcttcttcgacg
gcgtcgtctctcgccagagagttcgatcgtaagctgaccctcccgtccaccccgtcgccg
tcgtcgccagcgccaccaccaccggttccgtccgtacagacgccggcgccgtcgcaggct
ccacagttgcctgttgtgacggcgccgtcgtcgtcgaagtcgttacggcctccggcgaga
ccggggttcggtcgcgccggccgtaagtgcgtgatccgcgcgaaccactttctcgtcgac
gtcgtcgacaaggatctacaccactacgacgtgactataactccggaggtcacctcgaag
aatgtttgcagggagattattagtgagcttgtaacagcgtaccgtgagtctcacttgggc
aaatgctggccggcttatgatggcaggaagagtttatacactgctgggtcactgcctttc
tcctcaaaagactttgttgtcaagctagttgacaaagatcgtaaggacaggagagaacgc
aaatttgatgtggcaatcaagtttgctggcaaagcagacctgcatcacctccagcaattt
attggtggtatgcaacttgatgccccgcaagaaactctacaagttcttgacgttgtcctc
cgatcagcgccctccactaattatgttgttgtcggacggtcattcttctctcccagcttg
ggtgatcccccgggccctcttggtgatggcttacaatattggaaaggtttttatcaaagc
cttcgggcaactcagatgggtctctctcttaacgttgacacgtcggcaagagcattttat
gagccagttatggtttctcagtttgttgaaggaaactgcaatattagagatcttaggagg
cctttatctgatcaagatcgaattagggttaagaaagctctgaaaaatctcagagtagaa
cctgtttatcgggagcgcaggaaatacaaaatatctggtgtatcggctcaaccactaagt
caattaacgttttctagtgatgaacttggtgcaaagacgtcagttgttcagtattatcgt
gacagataccagatcaatctcagttatcctaatttgccagcacttcaagctggcagtgac
gcaaagcctgtctacctaccaatggagctttgtaagatcgttccaggacaaaggtacgtc
aaaaagttgaatgagaagcaggtgactgcaatgttaagggcgacttgtcaacgtcctcct
gatagagaacaaagtatcaacaagatggttgggtgcaacaattacaacaatgacaatctt
gtaaaggaattcgggcttcgagtaaaggttgagcctgcttcgattgatgctcgtgttctt
ccacctccgatgcttcagtacctgggtaagcaagaagctccacaggtgggctgttggaat
atgatcgataagaaaatgattaatggtggcaaggtcgcattctggacctgtgtcagcttc
tcacggttgagggaaaacgatgtctatagattctgtgaagagttggtcaacatgtgcagg
aataaagggatggatttcaatcctacacctttaattcccatcgattcagcacatcctggt
caaattgaggctgctctcaaatatattcacgagcagtcgaatgcagaaatatcgaagcta
gggcacgctgggaaacaacttcagttgttgattataattttgccagaagtcagtggatct
tatggaacaattaagcgggtgtgtgaaacagagttaggaatcatctcccagtgtagtcag
cctagacatgcaataaagtgcagtaagcagtatcttgaaaatctctccctgaaaatcaat
gtgaaggctgggggaaggaacactatgttatatgatgcggatccccgtgtgaagaaaatt
gaccttctaactgatcttgttacaataatatttggtgctgatgttactcatcctcaacct
ggggaggattcgagcccctcaatagctgcagtggtggcatcaatggactggccccaggta
accaagtacagaggattggtctctgcacaagcccacagggaggagataattagcgatctt
tatacagttactgaggatcctaataaaggaatagttcatggtggaatgatcagggagcag
ttaattgcttttaggagaataactgggcacaaaccggatagaatactcttttacagagat
ggagttagtgaaggtcagttcagcgaagtcctgctaagagaggttgatgcaattaggaag
gcttgcgtgtccttggaggcaaactatctaccgcgaattacctttgtggtggtgcagaag
agacaccacacccgcctttttcctgctcgacatggagaacgaggttcaacggataggagt
ggcaatattttaccaggtactgttgtggacacaaagatttgccatcctacagaatttgac
ttctatctttgcagccatgctggtattcagggaaccagtcgacccacgcattaccatgtg
ctatatgatgagaacaggtttcctgcagacgccttgcagatactcacaaacaacttgtgt
tacacgtatgcaaggtgtacccgttctgtatccgttgttcctccagcctattatgctcat
ttggcagcgtttcgtgcacgctactacatcgagggtcagatgtttgaaggcggatccagt
agtgaacggggcacggctgaaaggatttcggaggtcaggccgctgcctaggatcaaggac
aacgtcaaagacgtgatgttctactgctga
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