KEGG   Rhododendron vialii: 131313716
Entry
131313716         CDS       T09330                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
rvl  Rhododendron vialii
Pathway
rvl03030  DNA replication
rvl03410  Base excision repair
rvl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131313716
   03410 Base excision repair
    131313716
   03420 Nucleotide excision repair
    131313716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rvl03032]
    131313716
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131313716
Enzymes [BR:rvl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     131313716
DNA replication proteins [BR:rvl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    131313716
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      131313716
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 131313716
NCBI-ProteinID: XP_058198159
LinkDB
Position
13a:12753947..12788049
AA seq 2229 aa
MNGEGRRRGGDRRDLRLSKQQKLILTAEEQLESKLGFDLFSEGDKRLGWLLTFSSSSWED
QDTHKVYSCVDLYFVCQDGSTFKTKYKFRPYFYAATKDKMEIDVEAYLRRRYESQIADIE
IVEKEDLNLKNHLSGLRKPYLKISFDTVQQLMCVKSDLMHVVERNQAKLDAAEAYESVLT
GKSKQRPQDFIDCVFDLREFDVPYHVRFAIDNDVRSGQWYDVSVSSAGVMLERRIDLLQR
AEVHVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGEDIEDLEYTPKP
EFEGFFKVTNVKNEEELLRHWFAHMQEVKPGIYVTYNGDFFDWPFLESRAAHHGSRMSDE
LGFKCDQNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMV
RFAKERPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLL
MVQAYEANVICPNKHESDPEKFYSNHLLESETYIGGHVECLESGVFRSDLPTSFKLDPSA
YEQLINNLDRDLQYAIRVEGKMDLDLVSNYDEVKNAIMEKLMNLRDEPIREEFPLIYHLD
VAAMYPNIILTNRLQPPSIVSDEICTACDFNRPGKTCLRKLEWVWRGETYTAKKSDYFHM
KRQIESEFVDSGDGQISKSFLDLPKLEQQSKLKERLKKYCQKAYKRVLDKPVTELREAGI
CMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKTSGNSIKIQEAQDMVVLYDSLQL
AHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWC
ALPGSFPENFTFKTKDSKKKLTISYPCVMLNVDVARNNTNDQYQTLKDAVNKTYTTHSEC
SIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQA
ELFDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYG
QQKSCAVTTAKRLADFLGDAMVKDKGLRCQYVVACEPKGTPVSERAVPVAIFETDLEIVK
FYVRKWCKVSSDVGIRSIIDWSYYKQRLSSAIQKIVTIPAAMQKVANPVPRVVHPDWLHK
RVREKEDKFRQRKLVDIFSSLKTDGDINMSIGPTTTNQITDEKNLADLEDFKHGGGTSIT
RHRPIVRYEVNNRLHLVKASCQEDSPQKQSEGGGSVRQPLSPLHHNIINVEDIDRNVDYQ
GWLEVRKRRWKDTLEKRKRQRLGDLKALNQTNGAFGMPGKTNQKQTQRKTGVNSYFERQE
LALIRSHWQIVQIVPSSQHGQYFAWVVVEGFMRKIPIVVPRVFYLNSKAPITAEFPGRRV
NKILPHGRHSYNLIEVNIDEDQFRAESKKLAAHLADPEVEGIYETNMPLDFNAILQIGCV
CKLDKAAKKRNPQDGWTLDELHMKTTTECSYLEQSFSFFYVYHSISEGRAIYVGFFPASR
TISVVVVNPFQNKELSPHIIEKQYREASQALSIEPPMPRDSTNFKVDYVGNVKDAEKIIQ
RIINEYRQLHHVPAIAVIECPEVHLMKSHIRALDDFPCVSIPCNARDSNYQALGWQIMAS
KIGMQRCAASSQWLNERISLSRYAHVPLGNFELDWLMHTADIFFSRALRDQQQVLWISYT
GNPDLGGINEEESCFADEVNQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQLNEMEGGV
LFGLEQDLNPGAHTLNEHCCFDEVTSCSPAFRVLKQLIQRCLTDALTSGNVFADAILQHL
YRWLCSPHSKLHDPALHRMLHKVMQKVFALLLAEFRKLGAAIVFANFSKVIIDTGKSDLY
AAKAYCDSLLKTLQARDLFEWIELEPVQFWHSLLFMDQFNYGGIQARLNGQSLEGLSESE
SGSELDESQVDIVSSWNIAENLPKTTQDHFILIVSEFIYIPWKYAREQTAIRALVRDGNL
CTPSISGAAAESFESHMTEYLREQISSYFADKLLRIVRDAIHHTKGMNNPSADQHMSYGH
PLVTNIHMGDPALDFIKHVCAVLALDQNVQHDILIMRRNLLKYVRVREFAPEAEFRDQCL
SFTLPNVICSYCNDCRDLDLCHDKAFLAQEWRCGVPQCGQPYDREAMENVLLQIVRQRER
LYQLQDLVCLKCNQVKAAHLSVVCACAGSFRCKEDVSEFRNKMQIFLNIAIHQKFQLLEE
CTSWILEMK
NT seq 6690 nt   +upstreamnt  +downstreamnt
atgaacggcgaaggtcgaagaagaggaggagaccgacgagatctaagactctcgaagcag
cagaagctcatcctcaccgccgaagagcaactcgagtccaagctcggtttcgatctcttc
tccgaaggcgacaagcgcctcggctggcttctcaccttctcatcctcatcttgggaggat
caggatacccacaaggtctacagttgtgttgatctctactttgtttgtcaggacggctct
acttttaagacgaagtacaagttccggccatatttttatgcggctacgaaggataaaatg
gaaatagatgttgaggcctacttgagaagacggtatgagagtcagattgctgatatagaa
attgtagagaaagaagaccttaatcttaaaaaccatctatccggtctacgtaaaccttat
ctcaagatatcctttgataccgttcaacaactgatgtgtgtaaaaagtgatcttatgcat
gttgttgagagaaaccaggcaaaactcgatgctgctgaagcttacgagtccgtattaaca
ggaaaaagcaaacaacgaccgcaagatttcatagattgtgtatttgatcttcgggagttt
gatgttccttaccatgttcgttttgctattgacaatgatgtgagatctgggcagtggtat
gatgtaagtgtatccagtgctggggttatgttggaaaggagaatcgatctcctgcaacgt
gctgaagttcatgtttgtgcatttgatattgagaccaccaagcttcctttaaagtttcca
gatgctgagtatgatttaataatgatgatctcctacatggttgatgggcaagggtatcta
attattaacagagagtgtgtaggagaagatatagaggatttggaatacactccaaaacca
gaatttgaaggtttttttaaagttaccaatgtgaaaaatgaggaagagcttcttagacat
tggtttgcccacatgcaagaggtgaaacctgggatatatgttacgtacaatggtgacttt
tttgattggccattcctagaaagcagagcagcccatcatgggagtagaatgagtgatgag
ttaggattcaaatgtgaccagaatcaaggggaatgtcgtgccaaatttgcttgccatctg
gattgctttgcatgggtcaaacgtgatagttatcttccccagggaagccaaggcttaaag
gctgttaccaaggccaaattgggttatgacccattggaggtgaatccagaggatatggtt
cgttttgcaaaggagaggccccagatgatggcctcctattctgtttcagatgccgttgca
acttattacttgtatatgacctatgtccatccattcattttctctcttgccacaataata
cccatgccaccagatgaggttttgcgtaaaggaagtggaaccctttgtgagatgcttctt
atggttcaggcatacgaggcaaacgttatttgtcctaataaacacgaatcggatccagag
aagttctatagtaatcatctcttggagagtgagacatatattggtggccatgtggaatgc
ctggaaagtggtgtttttagatctgatctaccaactagttttaagcttgatccatctgct
tatgagcaattgatcaataatcttgatcgggatctgcaatatgctattagagtggagggt
aagatggacttggatttggtttcaaattatgatgaagtgaagaatgccattatggaaaag
cttatgaatctgcgagatgaacctatacgtgaagaattcccacttatttatcatctagat
gtggctgcaatgtacccaaacattattttgacgaacaggctccagccaccatcaattgtc
tcagatgagatctgcaccgcatgtgatttcaaccggccgggcaaaacttgtcttcggaag
cttgaatgggtctggcgtggggagacatacacggcaaagaaaagtgattactttcatatg
aagaggcaaattgagtctgagtttgttgatagtggagatggccagatatcaaaatccttt
ctggatctacctaaattggagcagcaatcaaaactcaaagagcgcctaaagaaatactgt
cagaaggcttataaacgggtacttgacaagccagtaactgagctacgagaagcagggatc
tgcatgcgtgaaaaccctttttatgttgacactgtccgcagcttccgagatagaaggtat
gaatacaaaggactcaataaggtttggaagggaaagctgtcagaagcaaagacaagtgga
aattctataaagattcaagaagcacaagatatggtagtactttatgattctctacaactg
gctcataaatgtattctcaattccttctacggatacgtcatgcgaaagggtgcaagatgg
tactctatggaaatggctggagttgttacatatactggtgcaaaaataatccaaaatgca
cgtttactcgttgagaaaattggacgaccacttgaattagacactgatggtatctggtgt
gctttacctggatccttccctgagaacttcacttttaaaacaaaagactcaaagaagaag
ctgacaatttcatatccttgtgttatgcttaacgttgatgttgcaaggaacaacacaaat
gatcagtaccagacactcaaagatgcggttaataaaacatacacaactcacagtgaatgc
tcaattgaatttgaagtagatggaccctataaggcaatgattcttccagcttctaaggaa
gaaggaattttaattaagaagcgctatgctgtttttaatgatgatgggactctggcagag
cttaaaggtttcgagatcaagcgtagaggtgagctgaagctcatcaaagtttttcaggct
gagctttttgacaaattccttcatggatcaaccttagaggaatgctactctgctgttgca
tcagttgccaaccgttggctcgatcttctcgataatcaagggaaggatattgcggacagc
gagttacttgattatatatcagaatcaagcacgatgagcaagtccctagcagactatggc
caacaaaagtcatgtgcagttaccactgcaaaacgtcttgctgattttcttggtgatgca
atggtcaaagacaaaggactgcgttgtcaatatgtagttgcatgcgagccaaagggtaca
ccagtaagtgagcgtgctgtccctgttgcaatatttgaaactgatcttgaaatagtgaag
ttttatgtgcggaagtggtgcaaggtttcatcagatgttggtattcgctccattattgat
tggtcctattacaagcaacggcttagctcagcaattcagaaaattgttaccattcctgct
gcaatgcagaaggttgcgaatcctgtacctagggtagttcatccagattggttgcataag
agggttcgtgagaaggaggataaatttcgccagcggaaattggttgatattttcagctca
ttgaagacggatggtgacattaacatgagtattggtcctacgaccaccaatcaaataaca
gatgaaaagaatcttgctgatctggaggactttaagcacggaggtggaacttctatcacc
agacataggcctattgttcgttatgaagtcaataacagattgcatctggttaaggcaagc
tgtcaagaagattctccacagaaacaaagcgaaggtggtggaagtgtgcgtcaaccattg
tcaccgctgcaccacaatatcataaatgttgaagatattgacagaaatgtggattatcaa
ggatggcttgaggtaaggaagagaaggtggaaagatactctcgagaaaaggaagcggcaa
aggttgggagatttgaaggcactaaaccaaactaatggtgcttttgggatgcctggaaag
acaaatcagaaacaaactcagagaaaaactggggtcaattcctattttgagaggcaggaa
ttagcccttatacgctctcactggcagatagttcaaattgtaccgagttcgcaacatgga
caatactttgcctgggttgtagtagaaggcttcatgcgtaagattcctattgttgtaccc
cgagttttttacctcaactctaaagctcctataacagcagaatttcctggaaggcgtgtc
aacaagattcttcctcatggacgccatagctataacctaattgaggtcaacattgatgaa
gatcaatttagggctgaaagcaagaaacttgctgctcatcttgcagatccagaagttgag
ggaatatatgagacaaacatgccattggattttaacgccatccttcagattggttgtgtt
tgtaaactggataaagcagctaagaaacgaaatccccaggatggctggactctggatgaa
ttacacatgaagacaacaacagaatgctcttatttggaacaatcattctctttcttctac
gtgtatcacagcatctccgagggacgggctatatatgttggattttttcctgcatctagg
acaatatcagttgtggtggttaatcctttccagaataaggaactatcaccacatattatt
gagaagcaataccgtgaagctagtcaagcattgtcaattgaacctcccatgcctagagat
agtaccaattttaaggtggattatgttggaaatgtcaaggatgccgagaagattatacaa
aggataataaatgaatacaggcaactacatcatgtacctgcaattgctgtaattgagtgc
ccagaagtccatctgatgaagtcgcatatacgtgctctggatgatttcccatgtgttagc
atcccttgtaatgctcgtgatagtaactatcaggctcttgggtggcaaattatggcatca
aaaattggaatgcaacgatgtgctgcatcatctcagtggttgaatgagagaatttctctt
tcgcgatatgcccatgttccactagggaattttgaacttgattggctcatgcatacagca
gatatcttcttttcaagagctttacgtgatcagcaacaggtactttggatatcttatact
ggcaatccagatcttggaggcattaatgaagaagagtcgtgttttgctgatgaggtcaat
caacctgttcttacttaccctggagcgtacaggaaagttactgtagaactaaagattcat
cacctggctgttgatgctcttctgaaaagcaatcagttgaatgagatggaaggaggtgtc
ttgtttgggttagagcaggatttgaatcctggagcacatactttgaatgaacactgttgc
tttgatgaggttacctcatgttctcctgcgttccgtgttctcaaacaattgatccaaaga
tgcctcacagatgcacttacgtctggaaatgtgtttgctgatgcaatattgcagcattta
taccgatggctttgcagcccacactcaaaacttcacgacccagctcttcaccgcatgctt
cataaggtcatgcaaaaagtgtttgcgctgttgttggccgaatttcgtaagttgggtgct
gcaatcgtgtttgccaacttctcaaaagttattatagacacagggaagtcagatttatat
gcagccaaagcctactgtgatagtttactcaaaactctacaagctagagacctattcgag
tggattgagcttgagccagtgcagttttggcattccttgcttttcatggatcagttcaac
tatggtggaatccaggctagactgaatggccaatcattagaaggtctttctgaatcagaa
agcggaagcgagcttgatgaatctcaagtagatattgtttcaagctggaatattgctgaa
aacttacctaagactactcaggatcacttcattttgattgtctcagaattcatatatata
ccatggaaatatgcacgagaacaaacagcaattagagcattggtgagggatggcaactta
tgcactccatcaatatctggtgcagctgctgaaagttttgagtcacacatgacagaatat
ctcagggagcagatcagctcttacttcgcagataaacttctaaggattgttcgtgatgcc
attcatcatacgaagggaatgaacaatcctagtgctgaccaacatatgtcctatggacat
ccgcttgtcactaatatccatatgggtgatcctgcgctagatttcattaagcatgtctgt
gctgttctggctctcgatcaaaatgttcagcatgatattctgatcatgaggaggaatctc
ttaaagtatgtgcgcgtgagggagtttgctccagaagctgaatttcgcgatcagtgtcta
tccttcactttgccaaatgtcatttgtagctactgcaacgactgcagagacctagacttg
tgccatgacaaagcctttttggctcaagagtggcgctgtggtgtgccacagtgtgggcag
ccatatgatcgtgaggcaatggagaatgttcttcttcagattgtaagacaaagagaacgc
ctctatcagcttcaagacctagtgtgcctaaagtgcaaccaggtcaaagcagcacactta
tctgtggtctgtgcttgtgctggatcatttagatgtaaggaagatgtgtccgagttccgc
aacaaaatgcagattttcttgaacatagctatccatcagaaatttcaactactagaagaa
tgtacttcgtggattcttgaaatgaaatga

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