Rhododendron vialii: 131313765
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Entry
131313765 CDS
T09330
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00040
Pentose and glucuronate interconversions
rvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131313765
Enzymes [BR:
rvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131313765
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131313765
NCBI-ProteinID:
XP_058198249
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Position
13a:complement(4841996..4848999)
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AA seq
448 aa
AA seq
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MALSLRNFSAFSLLVLTLFLVGATAVMDVNETQHSRSDGNTMQLQSLNNSTMADRSSDEA
NTRNEQAVQDPDMVASMVDMSIRNSTERRKLGFFSCQTGNPIDDCWRCDPNWQSNRKRLA
DCAIGFGRNAIGGRDGKFYVVTDPNDYDAVNPRPGTLRHAVIQDEPLWIVFKRDMVITLK
QELIMNSFKTIDARGVNVHIANGACITIQYITNVIIHGLHVHDCIPTGNAMVRSSPSHYG
WRTIADGDGISLFGASHVWLDHNSLSKCADGLIDAIMGSTAITISNNYFTHHNEVMLLGH
SDSYVRDKSMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINS
QGNRYLAPTDPNAKEVTHRVQLDNGQWKSWNWRSEGDLMLNGAFFTPSGVGAAASYARAS
SLGAKSSSMVGTITSSAGVLNCRRGQQC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctctctcagaaatttctctgctttctcattgctggttctaacgctcttcctc
gtcggcgctaccgctgtaatggacgtgaatgagactcaacactctaggagtgacgggaac
acaatgcagttgcagagcttaaacaactcaacaatggcggataggtcaagtgacgaggct
aacacgcgaaatgagcaagccgtgcaggatcccgatatggtggcttccatggttgacatg
agcattcgcaatagcactgaaaggaggaagttgggattcttctcatgccaaactggcaac
cctatcgatgactgctggcggtgcgaccccaattggcaaagcaaccgcaagcgcctcgct
gactgtgccattggcttcgggcgtaacgccatcggcggtcgagacggcaagttctacgtc
gtcactgacccgaacgactacgacgcggttaatccccgacccgggacactgcgccatgct
gtcatccaggatgagcctctttggattgtcttcaaaagggacatggtgatcacgctaaag
caagagcttataatgaacagcttcaaaacaatcgatgctaggggagttaatgtgcacatt
gccaatggggcttgcatcaccatccagtatatcacgaatgtgattatccatggtcttcac
gtccatgattgcatacccacaggaaatgctatggtacgaagctcgccatcccattatggg
tggagaacaattgctgatggtgatggcatttcactttttggggcgagtcacgtatggtta
gatcataattctctctctaagtgcgccgatggccttatcgatgctattatgggatcaaca
gcgatcaccatctccaacaattacttcacccaccacaatgaggtgatgctactgggacat
agtgattcctatgttagagacaagagtatgcaggtaactattgcgtacaaccattttgga
gagggacttatccagagaatgccaaggtgtaggcatgggtatttccatgtggtgaacaat
gactacactcactgggaaatgtacgcaatcggtggcagtgccgatcccacgattaacagc
caaggaaacagatatcttgcccctaccgatcctaatgctaaagaggtaacgcatagagtg
cagctagataatggtcaatggaagagctggaattggagatcagagggtgatcttatgctc
aatggagccttcttcactccatcaggagtaggtgctgcggccagctatgccagggcctcg
agcttaggggccaagtcttcctccatggtaggcaccattacttctagcgctggtgtcctt
aattgccgaaggggccaacaatgttag
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