Rhododendron vialii: 131313931
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Entry
131313931 CDS
T09330
Name
(RefSeq) LOW QUALITY PROTEIN: clathrin heavy chain 2-like
KO
K04646
clathrin heavy chain
Organism
rvl
Rhododendron vialii
Pathway
rvl04142
Lysosome
rvl04144
Endocytosis
rvl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131313931
04142 Lysosome
131313931
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
131313931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131313931
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvl04147
]
131313931
Membrane trafficking [BR:
rvl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
131313931
Exosome [BR:
rvl04147
]
Exosomal proteins
Proteins found in most exosomes
131313931
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
PHD_like
Motif
Other DBs
NCBI-GeneID:
131313931
NCBI-ProteinID:
XP_058198408
LinkDB
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Position
13a:17603237..17608906
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AA seq
928 aa
AA seq
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MHLLPTLDFLLEARRNWDGLILAVGPLHIETLHWQVELVDGVVYQRRRRWNGEAIVESMV
FSPDKRYLSDADDRLVLKKNGCASYGGVGKGHGIGLGFIRLRNLICEATSFLXDVLKPNL
PEHGFLQTKILKINLVTCPNVVDAILANAMFSHYDHPGIAQLCEKASLYVQALQYYSELP
DIKRVIVNTHAIELPSLVELFVTLSMEWALECMKDGPLLVNLRPRGNPXIIVQVPICHAN
LAKEYFEQLGVNAFIKLFEQFKSYEGLYFFHGSYFSSSEDLGIHFKYIEVAAKTRQIKEV
ERVTRESNFYDTEKTKNFLMETQLPXQPLINEXDRFGFVPNLTHYLYSNNMLRYIEGYVQ
KVNPRNAPLVVGQLLDDESLEDFIEGLIVSIRSLFLVEPLEECEKRNRLXVLTPFLEHLX
EGSQDIHVHNALVFPEHFLTPNPYYDSCVVGXYCEKRDPTLVVVAYRRGQCEDELINVTN
KNSLFYLNCRYVVERIDGDLWEKVLNPNNEFRRQLIDQVVSTALHESKSPXQVFIAVKAF
MTADLPHELIELLEKIVLQNSAFSRNFNLQNLLILTAIMADPCRVMVYINRLDNFDRAAV
GEVAVEAQLYEETMAIFKQFNLNVQAVNVLLYNIRSIDRAVEFPFRVEEDAVWSQVAKAQ
LREGLVSEAIESFSAAXDADVYHDLVKYLLMVRXKTKEPRVDSELIYAYAKIDRVRDIEE
FILMPNVANHLNVAGLPKTKKTKKKIFFAFISNWAKLASTLIKLKQFQGAVDATRKASSS
KTWKEVCFACVDAEEFRLAQICSLNTIIQVDDSEEVSEYCXNRGSFNGLISLMESGLGLE
RAHMGIFTELGILYAXYHYEKLMEYIKLFSTHLNIPLLIXACNEQPXKEHTYSYIQYDEF
DNAATTTMNHSSEAWDHMQFKESALASM
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgttacctacattggatttccttttggaagcgaggaggaattgggacggtctg
attttggcagttggtcctctccacatagaaacacttcactggcaagtggagttagtggat
ggggtcgtctaccaacggaggaggagatggaatggagaagcaattgtagaaagcatggtg
ttttctcctgacaagcgttatctatctgatgcagatgatcgtttggtgttgaaaaagaat
gggtgtgccagttatggaggggtgggtaaggggcatgggatagggttgggattcataaga
ttgaggaacttgatctgcgaagcaacatcatttttgnncgatgttctgaagcccaatttg
ccagagcatggtttcctgcaaacaaagatcctaaaaattaatcttgttacgtgtcctaat
gtggtggatgctattttagcaaatgctatgtttagtcactatgaccatcctggtattgct
caactctgtgaaaaagctagtctctatgtgcaggcacttcagtactactctgaattaccg
gatataaaacgtgtcattgtgaatactcatgcaattgagctaccgtctcttgtagagtta
tttgtgactctttctatggagtgggcactggagtgcatgaaggacggacctttgttggtt
aacctaagaccaagaggcaacccctagataattgtgcaagtacccatttgccatgccaat
cttgccaaggaatactttgagcaactaggagttaatgcattcatcaaactttttgagcag
ttcaagtcatatgaagggctgtactttttccatgggtcatatttcagctccagtgaggat
cttggcattcacttcaagtacattgaggttgctgccaagactagacaaattaaggaggtt
gaacgtgtgacaagagaatcgaacttctatgacactgaaaagacaaagaacttcttgatg
gaaacacagcttcccnnacaaccacttatcaatgaatgagatcgttttgggtttgttcca
aatctgacccactacctttattccaacaacatgctccgctacatagaaggttacgttcag
aaggttaacccaagaaatgctccgttagtggtagggcaactgctggatgatgagagcctt
gaagattttattgaaggccttattgtctctatccgttctttgtttctagttgaaccacta
gaggagtgtgagaaaaggaatcgactttgagtacttaccccgttcttagagcatcttngt
gagggaagccaagacatacatgtccacaatgctctggtttttcctgaacactttctcacc
ccaaacccatactatgattcatgtgttgtgggcnaatattgtgagaagcgtgatcccacc
cttgttgttgttgcttaccgcagaggacaatgtgaggatgagcttatcaatgtaacaaat
aagaactccctattttatttaaactgccggtatgtagttgaaaggatagatggtgatctg
tgggagaaggttttaaaccccaataatgaatttagaagacaacttattgatcaagttgta
tctactgcgttgcatgaaagcaagagcccataacaagtttttatagctgttaaagctttc
atgactgctgatcttcctcatgaattaattgagcttcttgaaaagattgtgcttcaaaat
tctgcatttagcagaaacttcaatctgcagaacttgcttatcttgacggccataatggca
gatccatgtagggttatggtttacatcaatagactagacaactttgacagagctgcggtt
ggagaagtggcagtggaagcccaactgtatgaggaaacgatggcaattttcaagcagttt
aacttgaatgtccaggcagtcaatgtgttactatataatatcagaagcattgaccgggct
gttgaatttccatttcgtgtcgaagaagatgctgtttggagtcaggtggccaaggctcaa
ctcagggagggtttagtgagtgaggcaattgagtcatttagtgctgcttaggatgcagat
gtttatcatgacttggtgaagtaccttctgatggttaganaaaagacaaaggaaccaagg
gttgacagtgagctcatttatgcatacgcaaagattgatagggtgcgtgacatcgaggag
ttcatcctaatgcctaatgttgctaatcatctgaatgttgctggtttacccaaaacaaaa
aaaacaaaaaaaaagattttttttgccttcatttctaactgggccaagttggctagcaca
ctcatcaagcttaagcagttccaaggtgctgttgatgcaacaagaaaagcaagcagctca
aagacatggaaggaagtttgctttgcttgtgttgatgcagaagagttccgcttagctcaa
atatgtagcctcaacactatcatacaggtggatgactcggaggaggtcagtgaatattgt
taaaacagaggatccttcaacgggcttatatctctcatggaaagtggtttgggattggaa
cgtgctcatatgggtatcttcactgagttgggtatcctatatgcttgataccactatgag
aagcttatggagtatatcaaattgttttcaactcatctaaacattcctctactgatttga
gcttgcaatgaacaaccctgaaaggaacacacgtattcatatattcagtatgatgagttt
gataatgctgccacgaccaccatgaatcattcttcagaagcatgggaccacatgcagttc
aaagagagtgcattagctagtatgtga
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