Rhododendron vialii: 131314327
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Entry
131314327 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131314327
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131314327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131314327
Spliceosome [BR:
rvl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
131314327
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
131314327
NCBI-ProteinID:
XP_058198864
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Position
2a:complement(15068674..15090389)
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AA seq
557 aa
AA seq
DB search
MKTKREEEESVEGEEHSKRQKLLNEQSSSPSPLPPRLGFDNALLPLATYDDDDEDEEEDE
QRGAGGGTFGSGDGRIEPNGYRDGGEDDDEDEDDDGNTEQGLSQGKRNRVVELRRDCPYL
DTVNRQVLDFDFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLR
TEKVYCLPDGYEINDPSLDDIRHVLNPRFNKKQVEDLDRNKQWSRALDGSDYLPGMVGLN
NIKETDFVNVTIQSLMRVTPLRNFFLIPANYQHSKSPLVHRFGELTRKIWHARNFKGQVS
PHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLRNSKKSSSIIYQCFQGELEVV
KEIHGSAADGGTEHNGLVTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKF
DGESITEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDY
IPLPTPKENQKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHVSETLPQM
VALSETYMQIYEQQKGY
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaagagagaagaagaagagagcgtggaaggggaggaacactcgaagaggcag
aagctgcttaacgagcagtcttcttctccctctcccttgccgcctcggcttggattcgat
aatgctcttcttccacttgctacttacgacgacgatgatgaggacgaggaggaagatgag
cagagaggagcaggtgggggtacgtttggaagcggtgatggaaggatagagccaaatggg
tatagagatggcggtgaagatgacgacgaggatgaggatgatgatgggaacactgagcag
ggacttagtcaagggaagagaaatcgtgtagttgaactcaggagggactgtccttatctc
gataccgtgaatcgccaggttttggattttgattttgagaaattttgctctgtttctctt
tcaaacttgaatgtgtatgcttgtttggtgtgtgggaagtattaccaaggaagaggtcag
aaatctcatgcatatactcatagccttgaagccgggcaccatgtttatatcaatctccga
actgagaaagtttattgccttcctgatggatatgaaattaatgacccatctttggatgac
attcgacacgttttgaacccaaggtttaataagaagcaggttgaagaccttgatagaaac
aagcaatggtctagggctcttgatggttctgattaccttcctggaatggtgggcttaaat
aacattaaggagacggattttgtgaatgtcacaattcaatctttgatgcgagttactccc
ttgaggaacttcttccttatccctgcaaactatcaacacagcaaatctccacttgttcat
cgttttggagaactcactagaaagatttggcatgcccggaacttcaagggacaggtgagc
ccacacgagtttcttcaggcagttatgaaagcgagcaaaaaacgttttcgaataggtgcc
cagtctgacccagttgaatttatgtcgtggcttcttaatacactacatgcagatctaaga
aattcaaagaaaagtagcagcatcatttaccagtgctttcagggtgaattggaggttgta
aaagagattcatggcagtgctgcagatggtggaactgagcataatggtcttgttacagaa
actagcagaatgccattcttaatgcttggacttgatttgccgccgccgcctcttttcaag
gatgtgatggagaaaaacattatcccgcaggttccactcttcaacatactgaagaagttt
gatggtgagtccattactgaagttgtgcgtcctcgtatagcaaggatgagatatcgtgtt
acccgactgccacagtatctgattctccatatgcggcggtttacaaagaacaatttcttt
gtggagaaaaatcctactcttgttaattttccagtgaagaatttagagctgaaagattac
attcctttgccaacacccaaagagaaccagaaattgcgttcaaagtatgatttgattgcc
aatattgttcatgatggcaagccaggtgaaggatcctacagggtatttgtacagcggaag
tcagaagagctatggtatgagatgcaggacctgcatgtctcggaaactcttccacagatg
gttgccctctctgaaacgtacatgcaaatatatgagcagcaaaagggatattga
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