Rhododendron vialii: 131314454
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Entry
131314454 CDS
T09330
Name
(RefSeq) pleiotropic drug resistance protein 2-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
rvl
Rhododendron vialii
Pathway
rvl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131314454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rvl02000
]
131314454
Transporters [BR:
rvl02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
131314454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA
Rad17
SMC_N
AAA_30
RsgA_GTPase
AAA_22
AAA_33
AAA_18
AAA_23
AAA_25
AAA_28
Zeta_toxin
TsaE
nSTAND3
NACHT
cobW
AAA_17
NTPase_1
RuvB_N
AAA_5
ABC_ATPase
AAA_19
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
131314454
NCBI-ProteinID:
XP_058199070
LinkDB
All DBs
Position
13a:complement(12643991..12696066)
Genome browser
AA seq
1448 aa
AA seq
DB search
MATPFVADDLARTTSSARSWKSGSIREVWQGQPDVFQRNSTRRQEVDDEEELRWAAIERL
PTYDRVRKGMLQQVMSNGRVVRQEMDVTNLGSQDKKQLMESILKVVEDDNERFLQRLRAR
TDRVGIEIPKIEIRFQNFSIEGDAYVGTRALPTLLNSTLNAIEGIIGMIGLSPSKKRVVK
ILRDVNGIIRPSRMTLLLGPPGAGKTTLLKALAGKSDDNLRIAGKVTYCGKEFKEFVPQR
TSAYISQHDLHYGEMTVRETLDFSGRCLGVGTRYEMLLELSRREKEAGIKPDPEIDAFMK
ATAMAGQETSLITDYVLKILGLDICADIMVGDDMRRGISGGQKKRVTTGEMLVGPAKAFF
MDEISTGLDSSTTFQIVKYMRQMVHIMDVTMVIALLQPAPEAFDLFDDVILLSEGQIVYQ
GPRENILEFFEYMGFKCPQRKGIADFLQEVTSKKDQEQYWFKKNQPYRFISVPDFSKAFS
TFHVGQRISEDLRIPYDKSKAHPAALVTESYGISNRELFRACFSREWLLMKRNSFIYIFK
TVQLTIMAIIALTVFLRTEMKYGRIEDASKFWGALFFSMINVMFNGMAELAMTVFRLPVF
FKQRDSLFYPAWAFGLPIWLLRIPVSLVESGIWVILTYYTIGFAPSASRFFRQFLAFFGV
HQMALSLFRCLAAVGRTPVVANTMGMFTLLLVFVLGGFIVSKDDIEPWMIWGYWISPMMY
GQNAVAMNEFLDDRWSAPINGTSQPTVGKTLLDGRGLFVEEYMFWVCIAALLGFSLLFNG
LFISALTYLSPLGDSKVLLEDDQETNNRHQRTSNGEGTDMAVRNAGGDTSSSQVARGMVL
PFQPLSLAFDHVNYYVDMPAEMKSQGVDDNRLQLLRDVSGAFRPGILTALVGVSGAGKTT
LMDVLAGRKTGGYIEGSISISGFPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLR
LASDVNTERRKMFVEEVMDLVELHPLRHALVGLPGVNGLSTEQRKRLTIAVELVANPSII
FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIY
TGPLGRQSHKLVEYFEAVPGVAKIKDGYNPATWMLEVTANSIEAQLDVDFADIYANSDLY
RRNRDLIKELSTPAPGAKDLYFPNQYSQPFLTQCKACFWKQHWSYWRNSQYNAIRFFMTA
VFGVLFGVIFWDKGNKISTQQDLLNLLGAVYSAILFLGGTNASSVQTVVAVERTVFYRER
AAGMYSELPYAFAQVAIETIYVCIQTIIYSLFLFSMIGFEWKLAKVLYFYYFIFMCFTYF
SMYGMMVVALTPNHQIAAICMSFFLSFWNLFSGFLLPRPLIPVWWRWYYWCSPVAWTIYG
IFTSQVGDKDTALTLQDGTVTTVKIFLKDNMGFDEDFLVPIVFAHLGWVLGFFLVFAYGI
KFLNFQRR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggctacgccgttcgtagcggacgatctggctcggacgacgagcagcgcgcggagctgg
aagtcggggagcataagggaggtgtggcagggtcagccggacgtgttccagaggaacagc
acgcggcggcaggaggtggacgacgaggaggagctgagatgggcggcgatagagaggctg
ccgacgtacgacagggtgcggaaggggatgctgcagcaggtgatgagtaacgggagggtc
gtgaggcaggagatggacgtgaccaaccttggctcgcaggataagaagcagttgatggag
agtattctcaaggttgtcgaggatgataatgagaggttccttcagaggctccgtgctcga
accgacagggttggaattgaaattccaaagattgaaataaggttccagaatttctcaatc
gagggagatgcatatgtagggaccagagcacttccaactcttctcaattctaccctgaat
gcaattgagggaattattggaatgattgggctttctccatctaagaaaagggttgtcaag
atactccgggacgtgaatggaatcataagaccatcaaggatgacactgcttctggggcct
cctggtgctggaaagacaacattgctaaaggcacttgccgggaaatctgatgacaattta
aggatagctggaaaagtcacctactgtggcaaagagtttaaggaattcgttcctcagaga
accagtgcttacatcagccagcatgatcttcactacggtgagatgactgttcgcgaaaca
ctggatttttctggacgttgtttgggagttggaacgaggtacgagatgctcttggagttg
tcaagaagagagaaagaagcaggcattaaaccggaccctgagattgatgccttcatgaaa
gccacagccatggctggccaggaaaccagtttgattactgattatgttctcaagatactt
ggattggatatttgtgctgatattatggtgggcgatgacatgcgaagggggatttccggt
ggacaaaagaagcgtgtcactactggagaaatgttggtaggaccagcaaaagcatttttc
atggacgaaatatccacggggctagatagttctaccactttccagatagtcaagtacatg
aggcaaatggttcacataatggatgtaaccatggtcatcgctctcttgcaaccagccccc
gaagcattcgatctcttcgacgatgtcatcctcctttctgaaggccaaattgtttaccaa
ggccctcgtgagaatattcttgagttctttgagtacatgggattcaagtgcccacaaaga
aaaggaattgcagattttctccaagaggtgacttccaaaaaggaccaagaacaatactgg
ttcaaaaagaaccaaccttataggttcatctcagtacccgatttttctaaggccttcagc
actttccacgtgggccaacggatttctgaagatctcagaattccttatgataagtcaaaa
gcccacccggctgcacttgtgaccgaaagctatggaatctccaatcgtgaactctttagg
gcatgcttttcgagggagtggcttctgatgaagagaaactcctttatttacatattcaaa
actgttcagttaacaatcatggcgataattgcattgactgtcttcttaagaacggaaatg
aagtatggtagaattgaggatgcttccaaattctggggggcgctgtttttcagtatgatt
aatgtgatgttcaatgggatggctgagcttgcgatgacagtgtttaggcttcctgttttc
tttaagcagagagatagcttgttctatccagcttgggcttttggcttgcccatttggctc
ctccgcattcctgtttcgttggtggaatctgggatatgggtcatacttacttattacacc
atagggtttgcaccgtctgctagtaggttcttcagacaattcctggctttctttggtgta
catcaaatggctctctctctcttccgatgccttgctgctgttggaagaactcctgttgtt
gctaatacaatgggaatgttcactttgctattggtttttgtgcttggaggcttcattgtg
tccaaagatgacattgaaccgtggatgatatggggatattggatttctcccatgatgtat
ggacagaatgcagttgcaatgaatgaatttctcgatgacagatggagtgcccccatcaat
ggcacttcccagcctacagttggaaagacccttctcgatggcagaggactctttgtggag
gaatacatgttctgggtttgtattgctgcgcttcttgggttttcccttctttttaatggt
cttttcatctcagcacttacatacctaagtcctttgggtgattctaaagtacttttagaa
gatgatcaagagactaataataggcatcaacgaacatcaaatggtgaaggtacggatatg
gctgtaagaaacgctggaggagacaccagctcaagtcaagtcgcaagaggaatggttttg
cctttccagcccctttcacttgcattcgaccatgtgaactactatgtggatatgccagca
gaaatgaagagtcagggagttgatgataaccgtttgcaacttttacgggatgttagtggt
gctttcagaccgggtattctgacagcactagttggtgttagtggtgctgggaagaccaca
ttgatggatgtcttagcaggaagaaaaaccggggggtatattgaaggatccataagcatt
tctggtttcccaaagaatcaagaaacatttgccagagtcagcggttattgtgaacaaaat
gacattcattcgccatatgttaccgtttacgagtctctgttatactctgcatggctgcgt
ctagcttcggacgtgaatacggaaagacgaaagatgtttgtggaggaagtcatggatcta
gtcgagcttcaccctctacgacatgctctagttggtcttccaggagtcaatggtctttca
actgaacagaggaagaggctcaccattgctgttgagttggtggctaatccatccatcatt
tttatggatgagcccacatcaggccttgatgcgagagctgctgcaattgtcatgcgtact
gtgaggaacacagtggacactggccgaactgttgtgtgcaccattcatcaacccagcata
gacatttttgaagctttcgatgagcttctgttgatgaagagaggagggcaagtgatatac
actggacctcttggtcgccagtctcataagcttgttgaatattttgaggctgttccaggg
gttgccaagattaaagatggttacaatccagctacatggatgcttgaggtcactgctaat
tcaattgaggctcaactcgatgttgactttgcagacatttatgccaattctgacctctat
cggaggaatcgggatcttatcaaggaactaagcactccagcaccgggtgccaaggacctc
tacttccccaaccaatattcccaacccttcctaactcaatgcaaggcttgtttctggaag
caacactggtcatactggaggaactcacagtacaacgccatccgatttttcatgactgct
gtctttggtgtactctttggtgtcatcttttgggacaaaggaaacaaaatatcaacacaa
caagatctgcttaacttgcttggagctgtctattctgccatccttttccttggaggcacc
aatgcttcttctgtccaaactgttgtagcagtggagagaacggtcttttaccgtgaaaga
gcagcaggaatgtactcagagttgccgtacgcatttgctcaggtggccatagaaactatt
tatgtttgcattcagacaatcatttactctctttttctgttctcgatgattgggttcgaa
tggaaattagccaaagtcttgtatttctactatttcatattcatgtgttttacctacttc
tcaatgtacgggatgatggttgtcgcgctgactccaaaccaccaaattgctgctatttgc
atgtccttcttcctcagtttctggaacttgttctctggtttccttctccctaggccgctt
atccctgtgtggtggaggtggtactactggtgctctcccgtcgcttggacaatctatggt
attttcacctctcaagttggagacaaggatactgcacttacattacaagatgggactgtg
acaacagtcaagatattccttaaagacaatatgggttttgatgaagacttcctcgtaccc
atagtgtttgcccatttgggttgggtgctcggattcttcttagtcttcgcctatggcatc
aagttccttaacttccaaaggagatag
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