Rhododendron vialii: 131314531
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Entry
131314531 CDS
T09330
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00240
Pyrimidine metabolism
rvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
131314531
Enzymes [BR:
rvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
131314531
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
DUF6750
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
131314531
NCBI-ProteinID:
XP_058199215
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Position
13a:31893619..31904796
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AA seq
350 aa
AA seq
DB search
MASSALSRLVNLQRHFQLTGSNRKGGNDDVGIGQVKLSADVSEALSHGRAVVALESTIIS
HGMPYPQNLETAKEVEAIVRENGAVPATVAILDGVPCVGLSAEELERLAIMGTKARKTAR
RDITYVVATRANGATTVSATMIFASMVGIHVFVTGGIGGVHRHGENTMDISSDLTELGRT
PIAVISAGVKSILDIPRTLEYLETQGVCVAAYQTDEFPAFFTETSGCKASCRIDTPEDSA
RLIVANMKLKLGTGILIAVPIPKEHSASGSLIESAIQKALNEARDKGITGNAETPFLLAR
VNELTGGASLSSNIALVKNNALVGAKIAVSLAQMGEDDRHGEFLSFFFVC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccgccctctcaaggcttgtcaaccttcaaagacactttcagcttacgggc
tcaaaccgaaagggcggtaacgacgatgtgggcattggccaggtaaagttatcagctgat
gtttctgaagctttatcacatggaagggcagttgttgcgcttgaatccaccataatatca
catggaatgccttatcctcaaaatttggaaacagccaaggaggtggaggcaattgtgagg
gagaatggagctgtccctgcaacagttgctattttagatggtgtaccatgcgtaggtttg
agtgcagaagaacttgagaggctggctataatgggaaccaaagctcgaaagacagctcgc
agggacatcacatatgttgtggcaaccagagcgaatggtgccacaactgtttctgccact
atgattttcgcttctatggttggcatccatgtatttgtcactgggggtattggtggagtg
catagacatggagagaatacaatggatatatcatctgatcttacagaacttggaaggact
cctatagcagtaatctctgctggcgtaaaatcgatattagatattcccagaaccctcgaa
tatttggaaactcaaggagtttgtgtggctgcttatcagaccgatgaatttccagcattc
ttcactgaaacaagtggctgtaaggcatcttgccggatagacacaccagaagactctgct
cgattaatagttgcaaacatgaagctcaagctcggaactggtattttgatagcagtgcca
attccaaaagaacattctgcttcaggcagtttgatcgagtctgcaatacagaaagccctc
aatgaagctagggacaagggtataacaggcaatgccgaaactccattcttgcttgctaga
gtgaatgaactaactggtggagcttctttgtcttcaaacattgctcttgtgaaaaacaat
gcgcttgttggtgccaagatcgctgttagtcttgctcagatgggagaagatgatcgccat
ggtgaatttttgtcctttttctttgtttgctaa
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