Rhododendron vialii: 131314642
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Entry
131314642 CDS
T09330
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131314642
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rvl01009
]
131314642
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131314642
Protein phosphatases and associated proteins [BR:
rvl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131314642
Spliceosome [BR:
rvl03041
]
Common components
Common spliceosomal components
SR proteins
131314642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
131314642
NCBI-ProteinID:
XP_058199416
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All DBs
Position
2a:complement(44846075..44872332)
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AA seq
208 aa
AA seq
DB search
MSHSREGRSSASPPYSKSRVRDRRSRSLSGSRRSRSRSRDSVGAVNPGNNLYVTGLSTRV
TNSELEKYFSREGKVTECQLVTDPHTKESRGFAFVTMETNEDAERCIKHLNRSVLEGRLI
TVEMDVTTHLHAGMREILVPVKAEEDHAPRTVGGAMMITLTRMGGVVVAATEERINSTRL
STTSHFKFSMVLVMSCRVMVAATVDPHK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcactcaagagaaggaagatcttctgcttcacccccctactccaagtcacgtgtt
agggatcgtcgatcgagatccttgtcagggtctaggaggagtcgctccaggagccgtgat
tctgttggtgctgttaatcctggaaataacttgtatgtaacgggtttgtctacaagggtt
actaacagtgaacttgagaaatatttcagccgtgaaggaaaggttactgagtgccagctg
gttacagatcctcacaccaaagaatctcgtgggtttgcttttgttactatggagacaaat
gaggatgcagaacgctgtattaagcatctaaatcgttctgtgctcgaaggacgattaatc
acagtggaaatggacgtgactactcacctccacgccggtatgagagagatcctcgtacca
gtgaaagccgaggaagaccacgctccccgcacagtaggaggggcaatgatgattactctg
actcgtatgggaggcgtggtggtggcggctacagaagagcgtattaactcaactcgatta
agcactacctcccatttcaagttttcaatggttctcgtcatgtcgtgtcgtgtcatggtg
gcggctaccgttgacccacataagtga
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