KEGG   Rhododendron vialii: 131314646
Entry
131314646         CDS       T09330                                 
Name
(RefSeq) uncharacterized protein LOC131314646 isoform X1
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
rvl  Rhododendron vialii
Pathway
rvl03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    131314646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rvl03009]
    131314646
Ribosome biogenesis [BR:rvl03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    131314646
SSDB
Motif
Pfam: Beta-prop_WDR75_1st Beta-prop_WDR75_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 131314646
NCBI-ProteinID: XP_058199417
LinkDB
Position
13a:33327768..33347647
AA seq 851 aa
MNFTVYYGSKFFPFTRFDASEMKSGLWPRCPGPASEEERLMLKGGRSFISSPPAFSNDAK
KLLICTGNTVSVFSTSTGLQITELEGHTALVSSIVIAPASTPSSKILCYCWTASLDGTIR
HWDFSVPELMKKIDIRFPIYSMVIPSLFIQSMETQEKTHDLFAYVSTAEANQQDKKPNAL
HGKIRKCNLTKSRLAGGVTLAETPKPEFISICSSGNYFGIQDKRKIRIWNVPAKDSERHD
IKKIRLHHTKKLTTLAFHPTKRIVAAGDVTGRILIWRGFGNRAFSLSDKRIKEALMSNDD
DRPGVRGDDDADSCTTWHWHSAEVKILLFSSDGAYLYSGGKEGVLVVWQLDTGKKKFLPR
IGSPIQFFTTSLDPSLSSVSCADNQIHLLKMPSMEILKSIAGIKLRCSVPEIKGSCSGFA
FDYTSGLVAVCAENYCIQLYSLFDDREISQVQICERNHQPGDELTVMVTLVALSLDGCVM
GTVETRLPEEGIGGLVSLKFWTHGQQNKDFSLSTIVYEPHRESDISAIAFHPSSRMAVSS
SYGGDFKVWICHHEIRRKDQMLQKTGWTCHAVGSYKKKPLTAAAFSADGSVLAVAAETVI
TLWDPEKNVLVAVVGDSLEPIESLSFLGKSEHLVSTSRGSNPLVSVWSMSKLSVSWSYKL
HAEAVTCSLDDSSFAVLARLPESSKLTESNETTLQSKDGAILLFNVGDPVPVATWFVEKS
RGGGLSFLHTNRASSEDKISDENSASVLLAYLNGDREYVVFNPYGEQEGGVAYRRSIVGL
EETGQIGYSSIYGELSEFELKRNQTQPGPFVPSERPWETIFSGPSHSLPPLTKLCSSFLE
SLLEKRTVVVE
NT seq 2556 nt   +upstreamnt  +downstreamnt
atgaattttacagtttattatgggtctaaattttttcctttcacaaggtttgacgcttcc
gaaatgaaatccgggctctggcctcgctgcccaggaccggcctcggaagaggagagatta
atgctcaagggtggaaggagctttatttcttccccgccagcattttcaaatgacgcaaag
aagttgctaatttgcaccggaaataccgtatctgtcttcagcacgtccactggcttacag
atcacggagttggaaggtcacacagcgctcgtatcatccatcgtaatcgctccagcttcg
actccttctagtaaaatcttgtgctattgttggacagcctcgctcgatggcaccattagg
cattgggacttttcagttccagaattgatgaagaagattgacattcgctttccaatttac
tccatggtaattccaagtttattcatacaatcaatggagactcaggaaaaaacacatgac
ctttttgcatacgtgtctactgcagaggcaaatcaacaagataagaagcctaatgcttta
catggaaaaattcggaagtgtaacttaaccaaatctcgtttagctggtggagttactttg
gcagagactccaaaacctgaatttatatccatctgttcctctgggaattactttggcatc
caagacaagcgcaagattcgtatatggaatgtcccagcaaaagattctgaacgtcatgac
attaagaagataaggttgcatcatactaaaaaattgactactcttgcttttcatccaacg
aagagaattgtagcggccggtgatgtaactgggaggatcttaatttggaggggttttggt
aatagagctttctcgttaagtgacaaacgaataaaggaggcattgatgagcaatgatgat
gataggcctggggtaaggggggatgatgatgctgattcctgcaccacatggcattggcat
tctgccgaagtgaagattctccttttctcttctgacggagcttatctttattcaggtgga
aaggaaggagttcttgtggtctggcaattagacacagggaagaagaaatttcttccacgg
attggatccccaatccagttttttaccacttctcttgatccttcactttcttctgtatct
tgtgcagataaccaaattcatctcctgaagatgccttcaatggaaattttgaagtccatt
gctgggatcaagcttcgctgttcagtcccagagataaaaggctcgtgcagtggatttgcc
tttgattacacttctggattagttgctgtatgtgcagagaactactgcattcaattgtac
agcttgtttgatgaccgtgaaatttctcaggttcaaatttgcgaaagaaaccatcaaccg
ggtgatgaactaacggtgatggtgactttagtagccctctctctagatggctgtgtaatg
ggcaccgtggaaactaggttaccagaagaaggcataggaggtcttgtcagtcttaagttt
tggacacacggacagcagaacaaagacttcagcttgtccaccatcgtatatgagccacac
cgagagtctgacatttcagctattgctttccatccttccagtcgtatggctgttagcagc
tcctatggtggtgacttcaaggtttggatttgccatcatgagattaggcggaaagatcaa
atgctgcagaaaactgggtggacatgccatgctgttggttcatacaagaaaaagcccttg
acagctgctgcgttttctgctgatgggtctgttctagctgttgctgcagaaactgttatt
acattgtgggatcccgaaaagaacgttcttgtggctgttgttggagatagcctagagcca
attgagagcctgtcatttctcgggaagtcagagcatcttgtgtctacaagtcgaggttca
aatccactagtctctgtttggagtatgtcaaagctttctgtttcttggtcatataagctc
catgcagaagctgtaacttgctcactggatgattcttcctttgctgttcttgcacgtctc
ccagagtcatctaaacttacagagtctaatgaaaccacgttacaaagtaaagacggggca
atattgttattcaatgttggagaccctgttcctgtggctacctggtttgtagagaagtct
aggggagggggcctttcttttcttcacacaaatcgagcttcctcggaagataagatttcc
gatgaaaattcagcctcagtcttgcttgcatacctaaacggtgatcgtgaatacgttgtc
ttcaacccctacggcgaacaggagggaggcgttgcttacaggcgcagtatagttggattg
gaagagactggacaaattgggtattcttcaatttatggtgagctatcagagtttgaattg
aagagaaatcagactcaaccaggcccatttgtaccatctgagaggccctgggagaccata
ttcagtggaccatctcatagccttcctcctcttaccaaattatgttcctcatttttggaa
tctctgcttgagaagagaactgttgtcgtggagtga

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