Rhododendron vialii: 131314666
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Entry
131314666 CDS
T09330
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
rvl
Rhododendron vialii
Pathway
rvl03082
ATP-dependent chromatin remodeling
rvl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131314666
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131314666
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rvl01009
]
131314666
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131314666
03036 Chromosome and associated proteins [BR:
rvl03036
]
131314666
Protein phosphatases and associated proteins [BR:
rvl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131314666
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131314666
SWI/SNF complex
131314666
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131314666
PBAF complex
131314666
SWI/SNF complex
131314666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GP70
Motif
Other DBs
NCBI-GeneID:
131314666
NCBI-ProteinID:
XP_058199458
LinkDB
All DBs
Position
13a:34689677..34699501
Genome browser
AA seq
253 aa
AA seq
DB search
MKHLSAASTYSNRNPVKFRIPTSDNLVPIRLDIEIDGQKFRDAFTWNPCDPDSEVVIFAK
KTVKDLKLPPAFITQIAQSIQSQLTEFRSLEGQDMYTGEKIVTIKLDLRVNHTLIKDQFL
WVSLLENEYQDLNNFESNPEEFARTFCADLGIEDPEVGPAVAVVIREQLYEIAIQSVASA
RETRINKKGRRGAEQFPASKAGGTALDLMKLFGYRSSVIRKRREWDVYEPIVDLLSNEEV
ETLEAREERSART
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacctctcagcagcatccacttactctaataggaatcctgtcaaattcagaatt
ccaacatccgacaatctagttcctattcgtctggacattgagattgatggtcagaagttc
agagatgcgtttacttggaatccttgtgatccagattcagaggtggtgatatttgcaaaa
aagacagtgaaagacttgaagcttcctccagctttcataacacagattgctcaatccatt
caatcacaactgactgaatttcgatcacttgaagggcaagatatgtacactggggagaag
atcgtcactatcaagcttgatcttcgagtaaaccacacactcataaaggaccagtttttg
tgggtaagtttattagagaacgagtatcaggacttgaacaactttgagagcaatccagaa
gaattcgcaagaactttttgcgcagatttgggtattgaagaccctgaagttggtcctgct
gttgcggttgtgatcagggaacaactatatgagattgcaattcaaagtgtagcttcagca
cgggaaaccagaataaataagaagggtcgcagaggggctgaacaattcccagccagtaag
gcaggtggaactgcattggacttgatgaaattgtttggttacagatcaagtgtcattcga
aagagaagggagtgggatgtctatgaaccaattgttgatcttctgtcaaacgaggaagta
gagacccttgaagccagggaagagaggagtgctcggacgtga
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integrated database retrieval system
