Rhododendron vialii: 131314686
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Entry
131314686 CDS
T09330
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131314686
04121 Ubiquitin system [BR:
rvl04121
]
131314686
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131314686
Membrane trafficking [BR:
rvl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
131314686
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131314686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING-like
Rad50_zn_hook
zf-RING_16
zf-RING_5
HypA
Motif
Other DBs
NCBI-GeneID:
131314686
NCBI-ProteinID:
XP_058199488
LinkDB
All DBs
Position
13a:8534576..8536332
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AA seq
389 aa
AA seq
DB search
MESTASYWCHRCTRFVRVWSEESLVCPHCDSGFIEAVTAAPPPSDSPRPFPAAAMYMIGP
TRPDPDRASNLRSRRQRRNHGDRSPFNPVIVLRGPADESRDDDGGEGGGGGERRSFELYY
NDGAGSGLRPLPAAMSEFLMGSGFDRLLDQLSQIEINGLGRHEQPPASKSAVESMPTVEI
VAGHVTSDSHCAVCKEAFVIGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPAESA
SSLDLDNGDEETVGLTIWRLPGGGFAVGRFTGGRRAGEREIPAVFTEMDGGFNSNSGGGA
RRIAWGPGRGRGREGNGGGGVGRVFRNLFSFIGRLGNSNSRPGRSGGDSQSVSSIRRSRS
HSSGSVFNRYFRRRNRAWVLGEENGMARW
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgacggcgtcgtactggtgccacagatgtactcgattcgtccgcgtctggtcc
gaggagagcctagtttgtccccactgcgacagcggattcatcgaggcggtcaccgccgcc
ccgccgccgtcggactctccccgccccttccccgccgcggccatgtacatgatcggcccc
acccggcccgatccggatcgggcgtcgaacctccgatcccgccggcagcggcggaaccac
ggcgaccggtcgccgttcaatccagtcatcgttctgcgcggtcctgctgatgaatctaga
gacgacgacggcggcgaaggcggtggcggcggagagaggaggagcttcgagctgtactac
aacgacggcgccggatccggtctccggccgctcccggcggccatgtcggagtttctgatg
gggtcggggttcgacaggttactggatcagctgtcgcagatcgaaatcaacgggttgggc
cgccacgagcagccgccggcgtcgaagtccgccgtggagtcgatgccgacggtggagatc
gtcgccgggcacgtgacctccgactcgcactgcgccgtgtgcaaggaggccttcgtgata
ggctcggaggcccgggagatgccgtgcaagcacatataccactccgactgcatcctcccc
tggctctcgctccgcaactcgtgccccgtctgccgccacgagctccccgcggagtccgca
tcgagtttagacctcgataacggagacgaggagacggttgggctgaccatatggaggctg
ccgggcggggggtttgctgtggggaggtttaccgggggtaggagggccggggagagggag
attccggccgtgttcacggagatggacggggggtttaatagtaatagtggcggtggggcg
aggaggattgcctgggggccggggagggggagagggagagaggggaacggtgggggtggg
gtggggagggtttttcgtaatttgttctcgtttattgggcggttagggaattccaattcc
aggcctggtcggtctggtggcgattcgcaatccgtgtcctcgattaggaggagccggagt
cattcttcggggtctgttttcaataggtactttagacggcggaatagggcttgggtgttg
ggagaagagaatggaatggcaaggtggtga
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