Rhododendron vialii: 131314881
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Entry
131314881 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131314881
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
rvl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131314881
03015 mRNA surveillance pathway
131314881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131314881
03041 Spliceosome [BR:
rvl03041
]
131314881
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131314881
Spliceosome [BR:
rvl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
131314881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
131314881
NCBI-ProteinID:
XP_058199782
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Position
13a:complement(8451272..8459462)
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AA seq
876 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELENLVDMTKVKMDVMRPWIANRVTELL
GFEDEVLINFIYGLLDGKVVNGKEIQISLTGFMEKNTGKFMKELWILLLSAQKNASGVPQ
QFLDAKEEETRKKKAETDRISSEIQKKKEREGRELEQEKMKKMDGEVDNSRANNVEHELR
TSSAHSLEEKGTGDRNGSRRRTRVSRSPHSADHSSLSPPNRRSRSISKSFSNSRSYSEER
RKSRSISESPHNRSRSISSERLKRSPPRRSVTPPSRRRPFHSRRRSTSRPRLRSPSPMRR
RLRSPPRRRSRSPIRLRSRSPVRRRSRSPVRYRSRSPIRRGSPSPVRRRSRSPVRRRSPY
TVRRRSPSPVRRRYRRSPSTPRHRSPSPRLRRSPIPSRRRLPTPPRHRSPSPEQWSSPSP
ARRLLPSPGRRKSPKRQRRSPVQSPRERNRTFEKLSPIRHARTRDNAESSAEIRKGIDSG
VLRTPISLRSPQRDPLDRDDTHKKPYSSSPSPDRSQSHSGPPPGSRRRSPSEDRRSFSPY
VSPVKQTKEQKLRDISASPPAKPRDQNPRLGIPVTRVEKEETYGRGSGDQKLKSSEKRSA
HVSTVDDRKASRERVPYKDDDTSERVGGRHSIEIRSRPDGLELRKKDQEIRSAKTSKSVI
HPEVAVQQKLLSIKEDTSLSERHRVSSPEDITKYDKKDDSRSDEVKGSKVFQASLKSIEG
DEEDRSGSLSSGSLERDKRHHEVREKRKHKRSERKEVASDDSDDSKIEGRKDAKRRRKEE
KKLRKDERRRRKEERRRRREERRRAEKLKEKSIETVSPPTDYEKNNDGNASDSERIVRTE
SGASDAEVTETEQKRLEIELRKKALESLRAKRGVGH
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcggttttttccgggggacgtcggccgatcaggacactcggttctcgaacaaa
caagccaagctcatgaaatcgcagaagttcgcccctgaactggagaacctggtggacatg
acgaaggtgaagatggatgttatgagaccgtggattgcgaacagggtgaccgagctcctt
ggattcgaagacgaagttcttatcaacttcatctatggtcttctagatgggaaggtagtt
aatggaaaggagattcagatttctctgaccggattcatggagaaaaatactggtaagttt
atgaaagagctttggattcttcttctcagtgcccaaaagaatgcgagcggcgtccctcaa
cagtttcttgatgcgaaagaagaggagactaggaagaagaaggctgagactgataggata
tcaagtgaaattcaaaagaagaaagagagagagggtagagaacttgagcaagagaaaatg
aagaagatggacggcgaggttgacaactcgagagctaataatgttgagcacgagcttagg
acttctagtgctcattccctagaggagaaggggactggtgataggaatggctcaagacga
aggaccagggtatctagatctccgcattcagctgaccactcctctttgtctcctccaaat
agacgttcgagatcaataagcaagtcattttccaattccagaagttattcagaagagaga
cgtaagtcgagaagtatatctgaatctcctcataacagaagccgctcaatttcttctgaa
aggttgaaacgctctcctccaagacggtctgttacacctccttcaagacgtaggccattt
cattctaggagaagatccacatcacgcccacgtcttcgatcgccttcgcctatgcgccgt
agattgcgttctcctccaaggcgcaggtcccggtctccaattcgacttaggtcgcgatca
cctgtacgacgtagatctaggtctcccgtacgatacagatcacgttcacccattcgacgt
ggatctccatctcctgttcgtcggagatcacgatctccggtgcggcgtagatcaccctat
actgtgcgccgcagatcaccatctcctgtgagacggcggtaccgaagatctccatctact
ccccgacacaggtctccatcaccaaggctacggagatccccaattcccagccgcaggaga
ttgccaactcctcccagacacaggtctccttcacctgaacagtggagttctccatctcca
gcacgccgcttgttgccttcaccaggcagaaggaaatcaccaaaacgccagaggaggtca
cctgtgcaatctcctagggaaagaaacaggacgtttgagaagctctctcctatccgacat
gctcgcacaagagacaatgctgaaagctctgctgagattcgtaaggggatagattctggt
gtgcttcgcacccccatttctttgagatcaccacagagagatccactggatcgggatgac
acccataagaaaccatactcctcatcgccttcaccagataggtctcaatctcattcagga
cctccaccaggctctaggagaagaagtcctagtgaagataggaggtcattcagcccatat
gtgagccccgtgaagcaaacaaaggaacaaaaactccgagatatcagtgcaagccctccg
gctaaaccaagagatcaaaatcctcgtcttggcattccggtgactagagtggagaaagaa
gaaacctatggcaggggcagtggtgatcagaagctgaaatcttcagagaaaagatctgca
catgtatcgacagttgatgaccgtaaagcttcacgtgagagggttccttacaaggatgat
gatacctctgaaagggttggtggtcgccattctattgaaattcggagccgccctgatggc
ctggaattaagaaagaaagaccaggagataagaagtgcgaaaacatctaaaagtgtaatt
catcctgaagttgctgtgcaacaaaagttactgtcaattaaggaagacacttcattgagt
gagaggcatcgggtatcatctcctgaagacattaccaaatatgataagaaggatgactct
cgttctgatgaggtcaagggcagtaaggtatttcaagcttcattgaagtcgatagaaggc
gatgaggaagatagaagtggttccctaagttctggctctctggaaagagataagcgccat
catgaagttcgtgaaaaaagaaaacataaaaggtctgaaaggaaagaagtggcatcagat
gacagtgatgattctaaaatagagggtaggaaggatgccaagagaagaaggaaggaggag
aagaaattgagaaaggacgagcggcgtcgacggaaggaagagaggcgtcgtaggagggaa
gagcgacgacgtgcagagaagttgaaggaaaagtcaattgagacagtttctccacccacg
gactatgagaaaaacaatgatggtaatgcttctgatagtgaacgcattgtgaggacggag
tctggtgcaagcgatgctgaagtaacagagactgagcagaaaaggcttgagattgaatta
cgaaaaaaggctcttgaatcacttagagcaaaaaggggcgttgggcattaa
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