Rhododendron vialii: 131314923
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Entry
131314923 CDS
T09330
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
rvl
Rhododendron vialii
Pathway
rvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131314923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131314923
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131314923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Methyltransf_2
Motif
Other DBs
NCBI-GeneID:
131314923
NCBI-ProteinID:
XP_058199836
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Position
13a:complement(10912695..10918236)
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AA seq
256 aa
AA seq
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MAGKSGATPTTYSPSPTTQNKKRPPIFNDVDWVRPDGRGFHQCRPAFLRTGAVNSASGSA
YAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFATPVRGQGSDHKEFSSILHK
ALEGGIILDSFPKTTVDVFALVLESGGGDLPVVISCASLALADAGIMMYDLIASVSVSCL
GKNLVIDPISEEESYQDGSLMITCMPSRNEVTQLTVTGEWSTPKIHEAMELCLDACSKLG
KIMRSCLKEAASPVQD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaaatccggagcaactccgacgacctactcgccgtcgccgactacacagaac
aagaagagaccgcccattttcaacgacgtcgactgggttcgccccgacggccgcggcttc
catcagtgccgccctgcctttttaaggactggtgcagtgaattcagcttctggatctgct
tatgcagaatttgggaatacaaaggtcatcgtgtccgtatttgggccaagggaaagtaag
aaagcaatgatgtacagtgatatagggcggctgaattgcaatgtcagttatacaactttt
gctaccccagttcgtggacagggatcagaccacaaggagttttcttcgattcttcataaa
gctttggaaggtggtataatactggattcttttcctaagactactgtggatgtttttgca
ttggtgttggaatctggtggcggtgatcttcctgtggtgatatcatgtgctagtctagca
ctagcggatgcagggattatgatgtatgacttgattgcctctgtttctgtgtcttgtcta
gggaagaaccttgtcatcgatcccatttcagaagaagaaagctaccaagatggaagctta
atgataacttgtatgccttcccgtaacgaggttactcaactgactgttactggagaatgg
tcaaccccgaagattcacgaggcaatggagctatgccttgatgcttgctctaaactgggg
aagatcatgaggtcatgtttgaaagaggctgcttctcctgtacaagattag
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