Rhododendron vialii: 131314942
Help
Entry
131314942 CDS
T09330
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rvl
Rhododendron vialii
Pathway
rvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131314942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131314942
03009 Ribosome biogenesis [BR:
rvl03009
]
131314942
04131 Membrane trafficking [BR:
rvl04131
]
131314942
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvl04147
]
131314942
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131314942
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
131314942
Membrane trafficking [BR:
rvl04131
]
SNARE
SNARE associated proteins
Others
131314942
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131314942
Exosome [BR:
rvl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131314942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_2
AAA_5
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Vps4_C
Viral_helicase1
AAA_7
NACHT
AAA_lid_PRS2_C
NB-ARC
TsaE
AAA_24
DUF815
Zeta_toxin
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
131314942
NCBI-ProteinID:
XP_058199903
LinkDB
All DBs
Position
13a:complement(11263353..11271112)
Genome browser
AA seq
808 aa
AA seq
DB search
MSHPAESSDSKGASKKDFSTAILERKKSPNRLIVDEAVNDDNSVVAMHPNTMEKLQLFRG
DTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRANLRVRLADVVSVHQCPDVKYGKRV
HILPLDDTIEGITGDLFDAYLKPYFMEAYRPVRKGDNFLVRGGMRSVEFKVIETDPGEYC
VVAPDTEIFCEGEPLRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSEDVDLERIAKDTHGYVGADLAALC
TEAALQCIREKMDIIDLEDDSIDAEILNSMAVTNEHFHTALGTSNPSALRETVVEVPNVS
WEDVGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGG
AADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRLQ
IFKSCLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRRGE
NPDSMDEDVDDEVTEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFS
ETTGTGGATGSDPFATSAGGADEDDLYG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacccagctgaatcctccgactctaaaggagcgtctaagaaggacttctccacc
gcaatcttagagaggaagaagtcgcccaatcggctcatcgtcgatgaggccgtcaacgac
gacaattccgtcgtcgccatgcaccctaacactatggaaaagctgcagctttttcggggt
gacacgatcctcatcaaggggaagaaacgcaaggacacagtctgtattgcccttgctgat
gaaacctgtgaagagcctaagatcagaatgaacaaggttgtcagagccaatctgagggtt
agacttgctgatgttgtatccgtgcaccaatgcccagatgtaaagtatgggaaacgtgtc
cacatattgccactggatgataccattgaaggcattactggggatctgtttgatgcctac
ctgaaaccttacttcatggaggcataccgcccagtgaggaaaggagacaatttccttgtt
agaggaggaatgaggagtgtagaattcaaggtcattgagactgatccaggagagtactgc
gtggttgcccccgacacagagatcttttgtgagggggagccgttgcgaagggaggatgag
gataggttggatgaggttggctatgatgatgtaggtggcgttaggaagcagatggctcag
attcgtgaattggtggagttgccattacgccatccgcaacttttcaaatctattggtgtg
aaaccacccaaaggcattttactctatggaccccctggttccggaaagacattgatagct
agggctgtcgctaatgagactggtgctttcttcttctgtataaatggaccggaaatcatg
tccaaattagctggagagagtgaaagcaatcttaggaaggcatttgaggaggctgagaaa
aatgccccatctatcattttcatcgatgagcttgattcaattgctccaaagagagagaag
acgcatggtgaagtcgaaaggcggattgtttcgcagctgttgaccctcatggatggactg
aagtctcgggcccatgttattgtgatgggggccacgaatcgtccgaacagcattgatcct
gctttgagaaggtttggtaggtttgatagagagatagacattggtgttcctgatgaagtt
ggacgccttgaagttcttcgcattcataccaagaacatgaagctctcagaagatgtcgac
ttggaaagaatagctaaagatactcatggctatgtcggtgctgatcttgctgctctttgc
actgaagctgcgcttcagtgcatcagagaaaagatggatatcattgatttggaagatgat
tctattgatgctgaaatactgaattccatggccgtaactaatgagcatttccatactgct
cttggaacaagcaacccatctgctttgcgtgaaacggttgttgaggtgccaaatgtcagt
tgggaggacgttggagggctcgaaaatgtcaagcgggagcttcaagagactgtccaatat
cccgtggagcatccagagaagttcgagaaattcggcatgtcaccttcaaaaggggttctt
ttctatggtccccctggatgtgggaaaactttacttgctaaggcaattgctaatgaatgt
caagccaatttcattagtgttaagggaccggaacttcttaccatgtggtttggtgagagt
gaagccaatgttcgagaaatttttgacaaggccagacaatctgcaccatgtgtcctcttc
tttgacgagcttgactctattgctactcagaggggtagcagtgttggagatgcaggtggt
gcagctgatcgggttctgaaccaactcttgactgaaatggatggcatgactgcaaaaaag
actgttttcataattggggccaccaacaggcctgatatcattgacccagcactcctgcgg
cctggccgtcttgatcagctaatttatatacctctgcctgatgaagactcgcgtctgcag
attttcaaatcctgcctgagaaaatcacccgtgtccaaggacgttgatttgagagccctg
gccaaatatactcagggttttagtggagctgacattacagaaatatgccagcgagcgtgc
aagtatgctataagagagaacatcgagaaagacatagagaaggagcggaggaggggggag
aaccccgactctatggatgaggacgttgacgacgaggtgacagagattaaggctgcccat
tttgaggagtcaatgaaatacgcgcgcaggagtgtgagtgatgctgacatacgcaaatac
caggcctttgctcagaccttgcagcaatctcgcggtttcggaacggaattcaggttttct
gagacaacaggaaccggaggagctacaggatctgaccccttcgcgacttctgctggtggg
gccgatgaagatgacctctatggttag
DBGET
integrated database retrieval system
