Rhododendron vialii: 131314943
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Entry
131314943 CDS
T09330
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rvl
Rhododendron vialii
Pathway
rvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131314943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131314943
03009 Ribosome biogenesis [BR:
rvl03009
]
131314943
04131 Membrane trafficking [BR:
rvl04131
]
131314943
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvl04147
]
131314943
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
131314943
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
131314943
Membrane trafficking [BR:
rvl04131
]
SNARE
SNARE associated proteins
Others
131314943
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131314943
Exosome [BR:
rvl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131314943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
AAA_lid_PRS2_C
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NACHT
Vps4_C
NB-ARC
AAA_24
TsaE
Zeta_toxin
DUF815
Zot
Motif
Other DBs
NCBI-GeneID:
131314943
NCBI-ProteinID:
XP_058199904
LinkDB
All DBs
Position
13a:complement(11294093..11301172)
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AA seq
808 aa
AA seq
DB search
MSHPAESSESKGGAKRDFSTAILERKKSPNRLIVDEAVNDDNSVVAMHPNTMEKLQLFRG
DTILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLADVVSVHQCPDVKYGKRV
HILPLDDTIEGITGDLFDAYLKPYFMEAYRPVRKGDNFLVRGGMRSVEFKVIETDPGEYC
VVAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSEDVDLEKIAKDTHGYVGADLAALC
TEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGTSNPSALRETVVEVPNVS
WEDVGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGG
AADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQ
IFKACLRKSPISKEVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERRRGE
NPDSMDEDVDDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFS
ETAGTGGASGTDPFATSAAGADEDDLYG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacccagccgaatcctccgaatctaaaggaggggctaagagggacttctccacg
gcaatcttggagaggaagaaatcgcccaatcggctcatcgtcgatgaggccgtcaacgac
gacaattccgtcgtcgccatgcaccccaacaccatggagaagctgcagcttttccgaggc
gacacgatcctcatcaagggaaaaaaacggaaggacacagtctgcattgcccttgctgat
gaaacatgtgaagagccgaagatcagaatgaacaaggttgtcaggtcaaacctgagggtt
aggcttgctgatgttgtatctgtgcaccagtgcccagatgttaagtatgggaaacgtgtc
cacatactgccactggatgataccattgaaggcatcacaggggatctgtttgatgcctac
ctgaaaccttattttatggaggcataccgcccagtgaggaaaggagacaatttcctcgtg
agaggagggatgaggagtgtagaattcaaggtcattgagactgacccaggagagtactgc
gtggttgccccagacacggagatcttttgtgagggggagcccgtgcgaagggaagatgag
gataggttggatgaggttggctatgatgatgtaggtggtgttaggaagcagatggctcag
attcgtgaattggtggagttgccattacgtcatccgcaacttttcaaatctatcggtgta
aaaccacccaaaggcattttactatacggaccccctggctccgggaagacattgatagcc
agggctgtcgctaacgagactggtgctttcttcttctgtataaatggaccggaaattatg
tccaaattagctggagagagtgaaagcaatcttagaaaggcgtttgaggaggctgagaaa
aatgccccatctatcattttcattgatgagattgattcaattgctccaaagagagagaag
acgaatggtgaagttgaaaggaggattgtttcgcagttgttgacccttatggatggactg
aagtctcgggcccatgttattgtgatgggggccacaaatcgtccgaacagcattgatcct
gctttgagaaggtttggtaggtttgatagggagatagacattggtgttcctgatgaagtt
gggcgccttgaagttcttcgcattcataccaagaacatgaagctctcagaagatgtcgac
ttggaaaaaatagctaaagatactcatggctacgttggtgctgatctcgctgctctttgc
actgaagctgcactacagtgcatcagagaaaagatggatgtcattgatttggaagatgat
tctatcgacgctgagatactgaattccatggcagtatctaatgagcatttccatactgct
cttggaacaagcaacccatctgctttgcgtgaaacggttgtcgaggtgccaaatgtcagc
tgggaggacgttggagggcttgaaaatgtcaagcgggagcttcaagagactgtgcaatat
cccgtggagcatcccgagaagttcgagaaattcggcatgtcaccttcaaaaggagttctt
ttctatggtccacctggatgtgggaaaactttacttgctaaggcaattgctaatgaatgt
caagccaatttcattagtattaagggacctgaacttcttaccatgtggtttggtgagagt
gaagccaatgttcgagaaatttttgacaaggctagacaatccgcaccttgtgtcctcttc
tttgatgagcttgactctattgctactcagaggggaagcagtgttggagatgcaggtggc
gcggctgatcgagttctgaaccaactcttgactgaaatggatggcatgtctgcaaaaaag
actgtttttataattggggccactaacaggcccgatatcattgacccagcactccttcgg
cctggccgtcttgatcagctaatttatattcctctgccagatgaagagtcacgccttcag
attttcaaggcatgccttagaaaatcacctatctccaaggaagttgatttgagagccctt
gccaaatacactcagggttttagtggagccgatatcacagaaatatgccagcgctcgtgc
aagtatgccattagagagaacatcgagaaagacatagagaaggagcggagaaggggggag
aatcctgactccatggacgaggatgttgacgacgaggtggcagagattaaggctgcccat
ttcgaggagtcgatgaaatacgcccgtaggagtgtgagcgatgctgacatacgcaaatac
caggcctttgcccagaccttgcagcagtctcgtggttttggatctgaattcaggttttcc
gagacagcaggaactggaggagcttctggaactgacccctttgcgacttctgctgctggg
gccgacgaagatgacctttatggttag
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