Rhododendron vialii: 131314949
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Entry
131314949 CDS
T09330
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131314949
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
131314949
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_14
MMR_HSR1
AAA_15
RsgA_GTPase
AAA_28
AAA_22
AAA_16
AAA_30
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
131314949
NCBI-ProteinID:
XP_058199918
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Position
13a:complement(11319636..11326405)
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AA seq
594 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAVAAAASSKATATVDDVSNGVDALQISDRTCTGVLC
SHPLSRDIRIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGRRELPI
PDHMDIHHLSREIEASDMSALQAVVSCDEERLRLEKEAEALAGQEDGGGENLDRIYERLE
AMDASTAEKRAAEILFGLGFNQKMQEKKTRDFSGGWRMRIALARALFMNPTILLLDEPTN
HLDLEACVWLEETLKNFESILVVVSHSQDFLNGVCTNIIHMQSKKLKIYTGNYDQYVQTR
GDLEENQMKQYKWEQEQIANMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVAR
DQVLVFRFPDVGKLPPPVLQFSEVSFGYNPENILYRDLDFGVDLDSRIALVGPNGAGKST
LLKLMTGELTPLDGMVKRHNHLRIAQYHQHLAEKLDLEMPALQFMIKEYPGNEEEKMRAA
IGRFGLTGKAQVMPMKNLSDGQKSRVIFAWLAFRQPQMLLLDEPTNHLDIETIDSLAEAL
NEWDGGMVLVSHDFRLINQVAHEIWLCENQKVTRWEGDIMDFKKHLKKKAGLSD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggatgcgagcaagaagaaggcggcccagaagaaggcggcggcggccgccaag
agaggagggaaggccgtggcggctgcggcgtcgtctaaggctaccgctaccgtcgatgac
gtgtccaacggagtcgacgcgcttcagatttcggatcggacttgtactggtgtcctctgt
tcgcatcctctctccagggatattcggatagagtctctatcactcactttccacggacac
gatcttatcgtcgattctgaactggaactaaactatggcagacgatatggtttacttgga
ttgaatggctgtgggaaatctacacttcttactgcaataggacgtagagagcttcccatt
cccgaccacatggatattcatcacctttccagggagattgaggcttctgacatgtctgca
cttcaggctgttgtgagctgtgatgaggagaggttgaggttggagaaagaagctgaagcg
ttggccgggcaggaggatggtggtggagaaaatcttgatcgcatttatgaacgtttggaa
gccatggatgcatcaactgctgagaagcgagctgctgagatcttgtttggtcttggtttt
aaccagaagatgcaagaaaagaaaacacgtgacttctctggaggttggagaatgaggatt
gctctggcaagggctctgtttatgaatccaaccatcctgttgctcgatgaacccaccaat
catcttgatttggaagcttgtgtctggttggaggaaactttgaagaatttcgagagcatt
ttggtcgtcgtttcacactcgcaggacttcttgaatggtgtttgcactaacatcatccac
atgcaaagcaagaaactgaagatttacaccggtaactacgaccagtatgttcaaactcgt
ggggacctagaagaaaaccaaatgaaacaatacaagtgggagcaggagcagattgccaat
atgaaggagtacattgcccgctttggacacggatcagcaaaactggcccgccaggcgcag
agcaaagagaaaaccctggcaaaaatggagagaggtggtctcacagagaaggtggctaga
gatcaggttctggttttccgatttcctgatgtcgggaagcttccgcctcctgtactccaa
ttctcggaagtctcttttggctacaaccccgagaacattctctatagggatcttgatttt
ggagtagatttggactctagaatagctctagtggggcccaatggagctgggaagagtact
ttgctgaagctgatgacaggggagttgacccccctcgacggcatggtcaagcggcacaac
cacctgaggattgctcagtaccaccagcatttggctgagaaacttgacctagagatgccc
gctctccagtttatgataaaagaatacccaggaaacgaggaagagaagatgagggcggcg
ataggcaggtttgggctgaccggaaaagcccaggtgatgcccatgaagaatttgtctgac
gggcaaaagagcagagtgattttcgcgtggctggcgtttcgacaaccccagatgcttttg
ttggatgaacctactaatcacttggatattgagactattgactcgttggctgaggccttg
aacgagtgggatggtggtatggtgctcgttagccacgattttaggctcataaaccaggtg
gcccacgagatctggctgtgtgagaatcagaaagtgacacgatgggagggtgatatcatg
gacttcaagaagcacttgaagaagaaagctggtttgtccgattga
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