Rhododendron vialii: 131315047
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Entry
131315047 CDS
T09330
Name
(RefSeq) exopolygalacturonase clone GBGE184
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00040
Pentose and glucuronate interconversions
rvl01100
Metabolic pathways
Module
rvl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131315047
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
131315047
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
131315047
NCBI-ProteinID:
XP_058200084
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Position
13a:complement(931415..934698)
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AA seq
412 aa
AA seq
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MGLLKRFEVNALFFVGLALLLSCGAKGARRGLVNNDPAVFDVTKFGAVADGETECAQAFI
QTFNAACASTGPSTVLIPPGTYLSGEVFFQGPCSSSPITVEMQGTILAQTDLTLYNNGVW
FTVENFDGLVMRGGGTFNGQGEKAWPKDSCGFKAACENRLAPSLVFSNMNNSLLQDINLV
NSKGFHMKIFHCNFFTAHNLNIAAPGDSPNTDGIHISESDQVTITDSTIGTGDDCISIGE
GSSNLNISRITCGPGHGISVGSLGLRPNERDVIGIVVTNCTLTNTTNGARIKTWHNSPPT
HASGIVFDDIVMNDVRNPIFIDQNYGSKQKQGSSSVKISDVHFRNIRGTTITNEAVSLQC
STTVPCEGIELVDINLTFIGITSPTIALPFSASCANAKAAFLGQQSPAACAS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggggcttttaaaaagatttgaagtcaatgctctattctttgtgggtctagccctgctg
ctctcttgtggggcaaaaggtgcccgccgtggccttgttaacaatgatcctgcagttttt
gatgttacaaagtttggtgctgtggcggatggcgaaaccgagtgcgcacaggcatttata
caaacatttaacgctgcatgcgcatcgaccggaccatccactgttcttatcccaccaggg
acctatttgtccggagaagtctttttccaaggcccatgtagctcgagtccgataacagtt
gaaatgcagggtaccatattggcccaaaccgacctcacattgtacaataatggtgtatgg
ttcaccgtcgaaaactttgacggtttagtcatgagaggcggaggcacctttaacggccaa
ggagagaaggcatggccaaaggattcttgtggttttaaagctgcctgcgaaaaccgtctc
gcaccgtctcttgtattcagcaacatgaacaattcacttcttcaagacataaatctggtg
aatagtaaaggattccacatgaaaattttccactgcaacttcttcacggcccataatctt
aacatagctgcacccggggacagtcctaacacagatggcatccatataagcgagtccgat
caagtcactataacagattctacgattgggaccggtgacgattgtatctctatcggtgaa
ggctcttctaatcttaacatctctcgtatcacttgtggcccgggacacggaattagtgtt
gggagccttggcctccgtccaaatgaaagggatgtcataggaattgtggtgactaattgc
acgctaacaaatacgacgaacggtgcaaggattaagacatggcacaactctcctccaact
cacgcttcgggcattgttttcgacgatatagtcatgaacgatgttaggaatccaatcttc
atcgatcagaactacggttcaaagcagaaacaagggtcatcatcagtgaagattagtgac
gtccacttcaggaacataaggggaaccacgatcaccaatgaagcagtttctctgcaatgc
agcacgactgtgccttgtgaaggcatcgaattggttgacattaatctcacctttatcgga
attacttctccgacaatagcgttgcctttttcagcttcttgtgcaaatgccaaggcagcg
tttttgggtcaacagagccccgcggcttgcgcgtcgtaa
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