Rhododendron vialii: 131315070
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Entry
131315070 CDS
T09330
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131315070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131315070
Spliceosome [BR:
rvl03041
]
Common components
Common spliceosomal components
SR proteins
131315070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
131315070
NCBI-ProteinID:
XP_058200110
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All DBs
Position
13a:1091696..1100244
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AA seq
303 aa
AA seq
DB search
MSRSSRTLYVGNLPGDIREREVEDIFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDA
IRGRDGYDFEGHRLRVELAHGGRGNSSAVDRYSGYKKGGGGGGGGGGGRGGVSRRSEYRV
LVTGLPSSASWQDLKDHMRRAGDVCFSQVFRDATGTKGIVDYTSYDDMKYAIRKLDDSEF
RNAFSDGIVRVREYKSSRSRSRSQSRSYSRSRSPSDSKGRSYSRSRSRSRSKSPKAKSSR
RSPSRSRSRSASPHARSGSKLRSQSRSPSRSRSPVPSRQKHDNKTLKKRSASRSRSRSKT
LSR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctcgagtagaacactctatgttggcaatcttcccggtgatattcgcgaaagg
gaagtagaagatatcttttacaagtatggaccaattgcccacattgatttgaagatcccg
ccaaggccccctggttatgcctttgtcgagtttgaagaggctcgtgatgctgaagatgct
attcgtggtcgtgatggttatgattttgaggggcatcggctgcgggtagagcttgcacat
ggagggcgcggaaattcgtcagctgtcgatcgttacagtggttataagaaaggaggagga
ggaggaggaggaggaggtggtgggcgtggtggagtgtctaggcgctctgaatatcgagtg
ttagtcaccggattgcctagctctgcttcatggcaagaccttaaggatcacatgcgtcgg
gcaggggatgtctgcttctcccaagtttttcgtgatgcaactggcacaaaggggattgtg
gactatactagctatgatgacatgaaatatgcaattaggaaactcgacgactctgagttt
cggaatgctttttctgatggaatagttcgtgtgagagaatataaatcaagtcgaagtcga
agccggagccagagccggagctattctaggagccgtagtccttctgactcgaaaggcagg
agctacagtcgaagcaggagtaggagcaggagcaagtctcccaaagccaaatcttctcgt
cgctcgccttctagatctcgttcacgatctgcttctcctcacgctcgttctggatcaaag
ctgcgctctcagtcgagatctccatcaagatccagatctcctgtaccatctcgccagaag
catgataataaaaccctcaaaaagcgcagtgctagccggagccgcagcaggagcaagact
ttatccaggtga
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