Rhododendron vialii: 131315152
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Entry
131315152 CDS
T09330
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131315152
Spliceosome [BR:
rvl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131315152
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
131315152
NCBI-ProteinID:
XP_058200227
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Position
13a:1812882..1822068
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AA seq
429 aa
AA seq
DB search
MAEGENPRKHSDESVKLFVGQVPKHVTEEELLAMFKEFALVDEVNVIKDKTTRASRGCCF
VICPTRQEADKAVDACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDAELS
AIFSQYGNITDLQILRGSQQTSKGCAFVKYETKEQALGAVEALNGKHTMEGSSVPLVVKR
ADTEKERQARRAQKAQSQASNMPNTNTSLHPSLFGSLAIPYSPPYSGYGYQPPGTYGLMQ
YRLPQMQNQPAFQNIIPSVNQGNALHGVTPNLGPSIPPRNYALPPARYVGSPYPAVPGLQ
YPVAYPGGMMSSRPLRPAIVNSPSAASSSVGRSSGGQVEGPPGANLFIYHIPQEFGDQEL
ANAFHPFGGVLSAKVFIDKETGVSKCFGFVSYDSPAAAQSAINTMNGSQLVGKKLKVQLK
RDNKQNNPY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggagaaaacccgcgaaaacacagcgacgagagcgtgaagctgttcgtaggt
caagtgccgaagcacgtgaccgaagaagaactcctcgcaatgttcaaggagttcgctctc
gtcgacgaagtcaacgtcatcaaagacaagaccacgcgagcttcccgaggatgttgtttc
gttatatgtccgactaggcaagaagctgataaggcggtggatgcgtgtcataataagaga
actctccctggggcatctagtcctttgcaagtgaagtatgcagatggcgagttggaaagg
ctagaacacaaactttttgttggtatgcttccaaagaacgtttctgatgctgagctttct
gcaatattttctcagtatggaaatattacggatttgcaaatactgagaggttctcagcaa
acaagcaaaggttgtgcttttgttaagtatgagacaaaggaacaagctcttggagcagta
gaagcactcaatgggaaacatacaatggagggttcaagcgttcctttagttgtcaaaagg
gctgatacagagaaagaaagacaagctcggcgggcacagaaagctcagtcacaggcttct
aatatgccaaatactaacacttcactgcatccatctttatttggatccttggctattcct
tacagccccccctatagtggttatggctatcagcctcctggaacttatggactcatgcag
tatcggctgccacaaatgcagaatcaacctgcttttcaaaacatcataccgtcagtaaac
caggggaatgcattgcatggagtcacacccaatctcggtcctagtatacccccaagaaac
tatgctctgccaccagcaaggtatgttggatctccttatccagcagtaccagggcttcag
tatcctgtggcatatcctgggggaatgatgagtagcaggcctttgagacctgcaattgtt
aacagtccgtctgcagcatcttcaagtgtcggtagaagttctggaggtcaagttgaaggt
ccacctggggctaatttattcatataccatattcctcaagaatttggtgatcaagaactc
gcaaatgcttttcatccatttggtggagtcttgagtgctaaggtcttcatcgacaaagaa
accggtgttagcaaatgttttggatttgttagttatgattcaccagcagccgctcagtct
gcaattaatacgatgaatggcagccagttagttggtaaaaagttgaaggtgcaacttaaa
agagacaacaaacagaataacccttactga
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