KEGG   Rhododendron vialii: 131315552
Entry
131315552         CDS       T09330                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI isoform X1
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
rvl  Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131315552
Enzymes [BR:rvl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     131315552
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    131315552
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C HHH_5 ResIII Helicase_dom4_arc ZW10_C2
Other DBs
NCBI-GeneID: 131315552
NCBI-ProteinID: XP_058200647
LinkDB
Position
2a:complement(37432927..37454875)
AA seq 2173 aa
MASGSPRTRIDQFFASKKKKKSLSSSLKPGRGDKDPKATLEASPSAKGSLDSYVVTSQDD
NCSDIPLCRAHVSSDREGLVKRSLTLEISSLTSYGNGNVSLSAPYQPQNSEAYGKDQKEG
SHVTSCVGDISDRALVNSESAVGAGNSELKQFATDFLSLYCSERPPSLSTPLEPKVSAHK
RQGSPSLLVVEDKSSKKRHCIVDGNESQAKIEATCYDEKDEELVEYGVIPECGEAFIKGS
RGMNVDTHMVEIHSSLRKCNTTLAASLYNTECDTPGLTTRACGTPKSTRGSSIFSPGEAF
WNEAIEVADGFLVTNDGILVPVAGELSIAKKRSDIKDTKILGSVGGDDASNKILDEGASR
VLGVEMNASMRSAGKHGNSLDEEASPLPVKHFSFEDKNMDEETLYSSSADNNNALMHKQG
KQQVQELPLVSDAAKQKVGTLRRDHESITSSTPYIGKRNLLPNSQNNEDSTPSSSVLLKN
HLDLRHWLPSEICSTYVKKGISQLYSWQVDCLQVDGVLERRNLVYCASTSAGKSFVAEIL
MLRRVLSTGKMALLVLPYVSICAEKAEHLEALLEPLGKHVRSYYGNQGGGTLPKDTSVSV
CTIEKANSLINRLLEEGRLSEVGIIVIDELHMVGDQSRGYLLELMLTKLRYAAGEGNGES
SSGESSGMSSGKNDPAHGLQIIGMSATLPNVSAVADWLQASLYQTDFRPVPLEEYIKVGN
TIYDKKMDVVRTISKTSDLSGKDPDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHVAK
FLRKFPASAHDDKNESIDVTSAIDSLGRSPAGLDPILEETLPFGVAYHHAGLTVEERETV
ETCYRRGLVRVLTATSTLAAGVNLPARRVIFRQPRIGREFIDGTRYRQMAGRAGRTGIDT
KGESVLICKPEEVKRIIKIVNDSCPPLHSCLSDDKNGMTHAILEVVAGGIVQTASDIHRY
VRCTLLNSTKPFEDVVKSAQDSLKWLCHRKFLEWNEDTKLYSTTPLGRASFGSSLCPEES
LIVLDDLSRAREGFVLASDLHLVYLVTPTNVEVEPDWELYYERFMELSALDQSVGNRVGV
VEPFLMRMAHHGPMRTANRSRDNTKGLMGRVGMTNHNMLSDEQTLRMCKRFYVALILSRL
VQEIPVAEVCEAFKVARGMVQALQENAGRFASMVSVFCERLGWHDLEGLVSKFQNRVSFG
VRAEIVELTSIPFVKGSRARALYKAGLRTPQAIAEASVSELVKALFEYSSWTAQENSAQR
RIQLSVAKKIKNGARKIVLDKAEEARVAAFSAFKSLGLDVPEFSRPLSLKVAGDAIRKEA
TTSSGEDSTGSFVVGVGVQHTKHSSKLIRDGSENLDKLKLEVGQEKSTKAFDVPLGISDE
AKSAAIMQTNFGAENPAAVEGPVILDEKNTTVNHIGNVVTSSSGPLLITGNENRTFDEYH
ERVGQERHDRENACFVSKENASSDKGPVSAVNISGGFDSFLDLWDTAQEFYFDIHFSKRP
KGNSSVPFEIHGIAICWENSPVYYVNLPKDLFWFKRRNDTLSMTISGDGDGGDVLAPKHR
FELAMQRWNRIVMIMGRKDVKKYTWNLKVQIQVFKVPAVSIQRLGSLNLAVKTLGLELVD
SSYYVLSPVFVRDGLDMCIVAWILWPDEERSSNPNLEKEVKKRLSSEAAAAASRSGRWKN
QMRIAAHNGCCRRVAQTRALYSVLWKLLISEGLVEALLSIEIPLVNILADMEVWGIGVDM
EGCLQARQMLGRKLRYLEKEAYRLAGMTFSLYSAPDIANVLYGHLKLPIPEGSNKAKQHP
STDKHCLNLLRHEHPIIPVIKEHRSLAKLLNCTLGSICSLARLSIRTQKYMLHGHWLQTS
TATGRLSMEEPNLQSVEHMVEFENYKDGDDSNVDRYCINARDFFVPTEDNWLLLAADYSQ
IELRLMAHFSKDTSLIELLSKSHGDIFTMIAAKWTEKEESTVTSQERDQTKRLVYGILYG
MGPNTLSEQLNCSLDDAAEKIQNFKRCFPGVASWLQEAVAYCRQKGYVKTLKGRKRFLAK
IKLGNSKERSKAQRQAVNSICQGSAADIIKIAMINIHSQIVGEVNDSDPATVAAKFHMLR
GRCRILLQVHDELVLEADPSVIMEAGWLLQMSMERAASLLVPLRVKMKVGRAWGSLEPFL
AEQNEQGVLVPSS
NT seq 6522 nt   +upstreamnt  +downstreamnt
atggcgtctggttcccctcggacgcgtatcgatcagttttttgcttcaaagaagaagaag
aaatctctttcatcatctttaaagcctgggagaggtgacaaagatccaaaagctacactc
gaagcatctcctagtgccaaggggtctctagacagctatgtggtgacttcccaagatgat
aattgttccgatataccgttgtgcagagctcatgtttcttcagatagggaaggtcttgtc
aagagaagcctgacactagagattagctcgttgaccagctatggaaatggaaacgtctcg
ttgtcagccccttaccaacctcaaaattctgaggcctatggaaaggatcaaaaggaagga
tcccatgtgacgtcatgcgttggtgatatttctgatagagctcttgtcaattcagagtct
gcagttggtgctggaaactctgaacttaagcagtttgcaaccgactttttgtcattgtat
tgtagtgaacgtccaccaagtctaagtacacccttagagccgaaagtgagtgctcataaa
agacagggtagtccatctttgctagtggtagaggataaatcatctaagaaaaggcattgc
attgttgacgggaacgagtcccaggccaagattgaagccacttgctatgatgagaaggat
gaggaattggtagagtatggtgtcatccctgaatgtggagaagcatttatcaagggttcc
agagggatgaatgtagatactcatatggtggaaattcattcgagcttgagaaaatgcaac
acaacattggcagcttcgttatacaatactgaatgtgatacacctggtctgactacccga
gcctgtggaactcccaaatcaacccgtggaagctccatattttctcctggagaagcattt
tggaatgaagcaattgaagttgctgatggttttcttgtgacgaatgatggcattttagtc
ccagtcgctggagaacttagtattgcaaagaaacggagtgatataaaggatacaaaaatt
ttgggaagtgtggggggtgatgatgcgtcaaacaaaatattggatgagggtgcaagtaga
gtcctcggtgttgaaatgaatgcttctatgaggtcagccggtaagcacgggaatagtttg
gatgaagaagcatcaccgttgcctgtgaagcacttctccttcgaggacaaaaatatggat
gaggaaaccctgtattcttcttcagctgacaacaataatgcgctgatgcacaaacaaggt
aaacaacaggtacaagagttgccccttgtgagcgatgcagccaagcaaaaagtgggtact
ttgaggcgagatcatgaaagcatcacatctagtacaccgtatattggcaaaagaaatttg
ttgccaaatagtcaaaacaatgaagacagtactccatcaagttctgtgctgctaaagaac
catttagatctaaggcactggcttccttctgaaatatgcagcacatatgtgaagaaagga
atctcacagttgtattcgtggcaggttgactgccttcaggtggatggcgttttagaaaga
agaaatcttgtctattgtgcttctactagtgctggtaaaagtttcgttgctgaaatttta
atgttacggcgagtcttatcaactggaaaaatggcacttcttgtacttccatatgtatca
atttgtgcagaaaaggcagagcatctagaggcccttttagaaccacttggcaagcatgta
cgcagttattatgggaaccaaggtggtgggactcttccaaaagatacctctgtatctgtc
tgcacaattgagaaggctaactctttaataaatagattgctagaagagggtcgtctttca
gaagttgggattattgtgatagatgaactgcacatggttggtgatcaaagtaggggttat
ctattggagcttatgttgacaaagcttcgttatgctgctggtgaaggcaatggagaatct
tctagtggagaaagttcgggtatgagcagtgggaagaatgaccctgctcatggtcttcaa
attattggtatgagtgcaaccttgcctaacgtgtctgctgttgctgattggcttcaagca
tctttgtaccagactgatttccgaccagttccgttagaggaatacattaaagttggaaac
accatttatgacaaaaaaatggacgttgttaggacaatctctaaaacatctgacctaagc
ggtaaagatccagatcatattgttgaattgtgcaatgaggttgttcaagagggtaattcg
gtgctgatattttgctctagtcgaaaaggatgtgaatctactgctaggcatgttgctaaa
ttcctcaggaaatttcctgccagtgcccatgacgataaaaatgaatccattgacgtcact
tcagctattgattccttgggaagaagtcctgcaggattagatcccattttggaggaaact
cttcctttcggcgtggcataccatcatgctggtctgactgttgaagaaagagagactgtt
gagacctgctatcgcagaggacttgtacgcgtcttaactgctacatctaccttagctgct
ggggttaacctacctgccaggagggtcatttttcggcaaccccggattggtcgtgagttt
attgatggaacaaggtacagacagatggctggtcgggctggtcggactggaatagatacg
aagggcgagagtgttttaatttgcaaaccagaagaagttaaaagaattataaaaattgtt
aacgacagctgtcctccgctgcattcttgtctctctgatgataagaatgggatgacccat
gcaattttagaagttgttgctggtggaattgttcaaactgctagtgatattcatcgatat
gttcgatgtacccttctcaattccacaaagccattcgaagatgttgtaaaatcagctcag
gattctctcaagtggctatgccacaggaaatttctcgaatggaatgaagacactaagttg
tacagcacaacacctcttggacgtgcatcttttggaagttctctgtgccctgaagaatca
cttatcgtgctagatgatctttcaagggccagagaaggatttgtgcttgcatctgatttg
catttagtatacttggtaacacccaccaatgttgaagttgaaccagattgggaattatat
tatgaaagattcatggaattgtcagctcttgaccagtcggttggcaatcgagttggagtg
gtagaaccctttttgatgcgtatggcccaccatgggcctatgcgcactgcaaacagatca
agggataacactaaagggctgatgggcagagttgggatgacaaaccataatatgctttca
gatgagcaaacacttagaatgtgtaaacgcttctatgttgctctcatcttgtcaagactt
gtgcaggaaatacctgtggctgaggtttgtgaagcctttaaagtggctcggggcatggtt
caggccttacaagaaaatgctggaaggtttgcatctatggtctctgtattctgtgagagg
cttggttggcatgacctggaaggcttggtttcgaagttccaaaatcgtgtttcgtttggg
gtccgagcagagattgtagagcttactagtattccatttgttaagggttctcgagctaga
gcactttataaggctggcctccgtacgcctcaagcaatagctgaagcatcagtttctgaa
cttgtgaaggctctttttgaatattcatcatggactgcacaagaaaattcagcacaacgg
cggatacagttgagtgtagcaaagaagataaagaatggggcacgcaaaattgttcttgat
aaagctgaagaggctagggttgctgccttctcagcttttaaatctcttgggctggatgtt
cccgaattttctcgacctctatcattaaaggttgctggtgatgccatccgaaaagaagca
actacctcttctggggaagactctacaggtagctttgttgttggtgttggtgtccagcat
acaaagcattcatctaagttgataagagatggatctgaaaatcttgataaactaaagcta
gaagttggacaagagaagtcaacaaaagcttttgatgttcccttggggatttcagatgaa
gcgaaatcagctgctatcatgcaaactaacttcggtgccgaaaatcctgcagctgttgaa
gggcctgttattctagatgagaaaaatactactgtcaaccatattggtaatgtagtcacc
tcctcctctggtcctttacttataactggtaatgaaaacaggacatttgacgaatatcat
gaacgtgttgggcaggagcggcatgacagagaaaatgcatgttttgttagtaaggaaaat
gcttcttctgacaaaggtcctgtaagtgctgtcaatatttctggtggatttgattccttt
cttgatctttgggatacagcccaagaattctattttgatattcactttagcaaaagaccg
aaggggaattccagtgtcccttttgaaatacacggcatagcaatctgttgggaaaattct
ccagtgtactatgtcaatcttcccaaggatctattttggtttaagagaaggaatgatacc
ttgtccatgactatttctggtgatggtgatggtggtgatgttttggcaccaaagcatcgg
tttgaactagcaatgcaaagatggaataggattgttatgatcatggggagaaaagatgtg
aagaagtatacttggaacttaaaagttcagattcaggtgtttaaagttcctgctgtttcc
attcagagattaggtagcctgaatcttgctgtgaaaactttgggtcttgaacttgttgac
agctcatactatgtgttgtccccggtattcgtacgggatggactcgacatgtgcattgta
gcatggatcttgtggcctgacgaggagagaagctccaaccccaatctggaaaaggaagtt
aagaaaaggttatccagtgaggctgcagcggctgctagtcggagtggtagatggaaaaat
cagatgcgcatagctgctcataatggttgctgccgcagagttgcgcaaacccgagcctta
tattctgttctctggaaattgctaatttctgaaggactagttgaagcccttcttagcatt
gagatcccactggtgaacattcttgcggacatggaggtgtggggaataggtgttgacatg
gagggatgccttcaggcccgtcaaatgttagggagaaaactaaggtatcttgagaaggaa
gcttacagactggctggtatgacgttttctttgtattcggcgccagatattgcaaatgtc
ctttatgggcacctgaagctgcccatacctgaaggttccaataaagcaaaacaacaccca
agcaccgacaagcactgtttgaacttgttgaggcatgagcatcccattattccggtcata
aaagagcaccgatctttggcaaagctattaaactgtaccttgggatcaatttgttcgctt
gctaggctttcaattaggacacagaagtacatgcttcatggccattggctccaaacatca
acagcaactggacgactttcaatggaggaacctaatcttcagagtgtcgagcacatggtt
gaattcgaaaattacaaagatggagatgattcaaatgtagatcgttattgtataaatgct
cgtgacttttttgtccctactgaggataattggttgctattagctgcagattattctcaa
atagaactgagactaatggctcacttttccaaagacacttcgctaatcgaactcctcagt
aaaagccatggtgatatcttcaccatgatagcagcaaaatggactgagaaagaggaatct
actgttacctcccaagaacgagatcaaaccaaaagattagtttatggcatcctgtatgga
atgggtcctaataccctttccgaacaactgaactgcagtttagatgatgctgctgagaaa
attcagaattttaaaaggtgttttcctggtgttgcttcctggcttcaggaagctgtcgca
tattgtcgtcaaaaaggatatgtgaagacccttaaaggaagaaagcgtttcctagcaaaa
attaagcttggaaacagtaaagaaaggtctaaagctcagagacaagctgtcaattctatt
tgtcagggatctgctgctgacatcatcaaaatcgcaatgatcaatatacattctcagatt
gttggagaagtcaacgattctgatccggcaacagttgcagcaaaatttcacatgcttagg
ggccgctgcagaatccttttgcaggtacatgatgaattagtactggaagcagatccttcc
gtcataatggaagctgggtggttgcttcaaatgagcatggagagagctgcgtcgctcctc
gttcctttgcgggtcaaaatgaaggttgggagagcatggggatctttggagcctttcctg
gctgaacaaaatgaacaaggagttttggttccaagttcttag

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