Rhododendron vialii: 131315622
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Entry
131315622 CDS
T09330
Name
(RefSeq) RNA-binding NOB1-like protein
KO
K11883
RNA-binding protein NOB1
Organism
rvl
Rhododendron vialii
Pathway
rvl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131315622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131315622
03051 Proteasome [BR:
rvl03051
]
131315622
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
131315622
Proteasome [BR:
rvl03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
131315622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
131315622
NCBI-ProteinID:
XP_058200774
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All DBs
Position
2a:complement(43983633..43988741)
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AA seq
645 aa
AA seq
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MAEEPPITPPPPPCWSNIVKQQQPLPNHHHPVSGGGLTAAAPDRVFVDSCKSSKGIAVAV
VDATAIIQGGEKLVNCADKFMSVSEVMDEVKDPMSRHRLNFVPFTVETREPSPESLKKVI
KFARATGDLQTLSDVDLKLIALTYTLESQIHGTAHLRDIPPPIHTVNVKRLPEKDMPGWG
SNVPNLEEWEALETEAEAEAKSNPNSRILPLKDLDLNAIPTAHHVSDEDCSMGHEGDFHV
GNEEDADGEFGKPRKNLPAKKEVNIEGKKMVADGIDASQGQFEDDAGDWLPAVSRSTHRK
YLRRKAKREMYGALSDKDSQQDAAENVDIDNIENETHQLTVEISDETPVDEILEERKVSE
EENIEGGLSTILNEMRLEEDSLKVLEEGKEAEWSNSCAGLESNTSTGEEPPSDDNANIDV
DGGQIENVNEELEHMDISSQTNGSVNASYVDDNSSEQSWTLRSLSESTVACITSDFAMQN
VLLQMGLRLLAPGGMQIRQLHRWILKCHACFKVTTEVGRIFCPSCGNGGTLRKVAVTVGE
NGIVLAARRPRISLRGTQFSLPLPKGGRDAITKNPILREDQLPQKFLYPKTKKKNKQGDD
IFSSDDIFRHQTDKKAPLQPPVRKALAVFSGKRNPNDNHYSRSKR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaacccccaatcactcctcccccaccaccgtgttggagcaatatagtgaag
cagcagcaaccactaccaaaccaccaccatcccgtcagcggcggcggcctcacggcggcg
gcgcccgatcgggtgttcgtggacagctgcaagtccagcaagggcatcgccgtcgcggtg
gtggacgccaccgccatcatacaaggcggcgagaagctcgtaaactgcgccgacaagttc
atgtccgtgtccgaggtcatggacgaggttaaagaccccatgtcacgtcaccgcctcaat
tttgttcccttcactgttgagaccagggagccttctcctgaatccctcaaaaaagttatc
aagtttgcaagggcaaccggtgacttacagacgctttctgatgttgatctgaagctcatt
gctttgacttatacactggaatctcagatccatggtactgcacatctcagagacattcct
ccccctattcacacggtaaatgtgaagaggttgcctgagaaagatatgcctgggtggggc
tccaatgttcctaatttggaagaatgggaagcattggagactgaggctgaggctgaggct
aaatcaaaccccaattcgagaatcctcccattaaaagacctagacttgaatgccatcccc
accgctcaccatgtgagtgatgaagattgttcaatgggtcatgaaggtgactttcatgtc
ggaaatgaggaagatgctgatggcgaatttggaaaacccaggaaaaatttacctgcgaag
aaagaggtaaacattgaagggaaaaagatggtggcagatggaattgatgcctctcaagga
caattcgaggatgatgctggtgactggctgcctgctgttagccgaagtactcatagaaag
tacctgaggagaaaagccaaacgtgaaatgtatggggccttgtctgacaaagatagtcag
caagatgcagcagaaaatgtagacattgataacattgaaaatgaaactcatcaactaaca
gttgaaatttctgatgaaacacctgtagatgaaattttggaggaaagaaaggtttcagaa
gaggagaacattgagggaggtctttcaacaattttgaatgaaatgaggctagaagaagac
tcattaaaggttcttgaagaaggaaaggaggcggagtggagtaattcatgtgcaggactt
gagtctaacacttccacaggggaggaacccccatctgatgataatgcaaatatagatgtt
gatggaggtcagattgaaaatgtcaacgaagaattggaacatatggatatttcaagccag
acaaatggaagtgtcaatgcttcatatgtggatgacaacagtagtgagcagagctggacg
ttaagatccttgtctgaatcaactgtcgcttgtataacgagtgattttgcaatgcagaat
gtacttctgcagatgggtttacggttgctggcacctggaggaatgcagatccgccagctg
cacaggtggatactgaaatgccacgcttgctttaaggtgactacagaagtcggtaggatc
ttctgccccagttgcggaaatggtggcaccctaaggaaggtagctgtcacagtaggtgaa
aatggcatagttcttgctgcccgccggccacgtatttccttgcgcggcacacaattttct
ctgcctttacccaaaggtggaagagatgccattactaagaaccctattctaagagaagat
cagcttccgcagaagttcctgtacccgaagacaaagaagaagaataaacagggagatgac
atcttttcttccgatgacatctttcgccaccaaacagataagaaagcacctctgcagcct
cctgtaaggaaagcattggcagttttcagtggaaagagaaatcccaatgacaaccattac
tcccgttctaagcgttag
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