KEGG   Rhododendron vialii: 131315636
Entry
131315636         CDS       T09330                                 
Name
(RefSeq) lysine-specific demethylase JMJ17 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
rvl  Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rvl01009]
    131315636
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rvl03036]
    131315636
Enzymes [BR:rvl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     131315636
Protein phosphatases and associated proteins [BR:rvl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     131315636
Chromosome and associated proteins [BR:rvl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    131315636
SSDB
Motif
Pfam: JmjC PLU-1 PHD zf-C5HC2 JmjN ARID KDM5_C-hel PHDvar_NSD BT_3657-like_N
Other DBs
NCBI-GeneID: 131315636
NCBI-ProteinID: XP_058200790
LinkDB
Position
2a:complement(44137607..44161369)
AA seq 1855 aa
MGKGRPRSVEKGVLAQSSTVAPSSLLDIQSAPAYYPTEEEFKDPLEFIHKIRPEAEPYGI
CRIIPPSSWKPPFALDLDKFEFPTKTQAIHQLQARPASCDPKTFELEYNRFLEEHCGRKS
PKRKVVFEGEDLDFCKLFNGVKRYGGYDKVVEEKKWGEVSRFVRPKGKISECAKHVLCQL
YREHLYDYESYYNRLNQQKAKNYKGGMHGDRKNQLGDVSSSYKRRRKNLEGERVKVCKVE
EERRDQICEQCRSGLHGEVMLLCDRCNKGWHIYCLSPPLKRVPIGNWYCLDCLNSDKDTF
GFVPGKQFALEAFRRVAERAKKKWFGSTPTSRVQLEKKFWKIVEGLVGEVEVMYGSDLDT
SVYGSGFPRANDQRPASIEVEKWEEYCASPWNLNNLPKLQGSMLRTVHNSIAGVMVPWLY
VGMLFSSFCWHFEDHCFYSMNYLHWGEPKYWYSVPGNEAKAFEKVMRKTLPDLFEAQPDL
LFQLVTMLNPSVLLENGVPVYSVLQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADWL
PHGGFGAELYQLYRKAAVLSHEELLCVVAKSDFDIKASPYLKKELHRIYDKEKTLREQLW
RNGIVSSSPMSPRKHPEYVGTEEDPTCIICQQYLYLSAIVCRCRPSALVCLEHWENLCEC
KPNRHRLLYRYSLAELKDLPLMTDKHDSGNIVQDRNLRRQLSSGDELGALTKKVKGGHVT
FSQLAEEWLLSSCKIFKAPYDKEVYVKALKKAEQFLWAGSEMDPVRDVTKNLLEAKSWAE
GVRDCLSKVEKWSAHRSCDTEKVKWDHVDNLLHRDPVPCNEPALVRLKEYEKEARALSQE
ISSALSKGSQLSIADWEILATRVCDFPICVTESERLVQSLSSAKVWVENVRKCVSEKAQT
AVEADILYHLQSEILELPLHPPEVEMLMGLLRQVELCQAQCKEMLKGPINLKKLEALFQE
WDDFTINIPELKLLKQYRSDAISWLSRLNDVLVNIHEREDQENVVNELSSIQRDGELLKI
QVNESSQVEVELKKACCRVKALKALGSKMSLDFIQQLMMEATMLQIGKERLFGNISGVLS
AAMFWEERATRILASEAQMFDFEDAVRTSEDICAILPSLGVVMDALSVAKSWLKMSEPFL
VSNLSLSCASSSLLKVDALEELVSQSKLLKISLRERSMLQSVLDNCIEWQNDACSTLHAV
ACFLNTEITHNEIASGLLSKVEQQVTGMESIIKAGLSLGLDFSEIPKLEDASSTLRWCFK
ALSFCSVVPQLEDVEMLMEAGLHLPVTYASSSLFSSLIDGVNWLKKAAEICVPSNRRKFK
LCDAEEVLGQSPVFLKIKVAFPVMVSQLSHAIRKHNLWLEQVHLFFKLKPCDRSWILFLE
LKELGSTDALNCPELDMVLSQFHKVEWWKQRCHNIAGTSVGDEKSLLHSLVKIKDALDRS
LYIFSLSKGCKARDLCMCCSRNFEDQKFLTCSMCNDWYHLQCKGQTLADTNDLALCICHY
CHFFDSGKISQDVGGPLIFEGKRAELNKLVELLSDAVDFSVWIEERSILSQLVEKTLACK
ACLAEVVDFALTYHDEDLSIVVKKLSIAMKAIEVAGVFYHQGCCNFELALARNSWRVRAN
KLFGGPQKPLIQQMQRHLKEGLAIRVPPEDHFWQKLAAVKHICTQWAEKAKKVSMDSGTL
GLENVFELVMEGENLPVQYEKELKLLRDRTMLYCICRKPYDQRAMIACDKCDEWYHFDCI
KLSATPKVYICPACKLETEDLHSSPVVTLDGSIGSKCEEPQTPSPRRREFRRKSRKHKSS
AKRKVVVTTACQSSNVLRHSSGIECLLWSNRKPFRRAARKRSQMDSLSQLFYIQK
NT seq 5568 nt   +upstreamnt  +downstreamnt
atggggaaaggaagacctaggtctgtagagaaaggggtgttggcgcagagttctactgtt
gcaccatctagtttgttagatatacagtctgcgccggcgtattatccgaccgaggaggag
tttaaggaccctttggagtttatccataagatcaggccagaggctgagccgtatgggatt
tgtaggatcattccgccgagcagttggaaacccccgttcgcgttagatttagataaattt
gagtttccgacgaagacacaggccattcaccagttgcaggcgcggccagcgtcgtgcgat
ccgaagacgtttgagttggagtacaataggtttttggaggagcattgcggtaggaagtcg
ccgaaaaggaaggtggtgtttgaaggggaggatttggatttttgtaagttgttcaatggg
gtgaagcggtacggggggtacgataaggttgtggaggagaagaagtggggggaggtttct
cggttcgtgcggccgaaggggaagatttctgagtgcgcaaagcacgtgttgtgtcagttg
taccgggagcatttgtatgattatgagagttactataatcggttgaaccaacagaaagcg
aagaattacaaggggggaatgcatggtgaccggaaaaaccaacttggggatgtttcttca
agttataaaagaaggaggaagaatcttgagggcgagcgtgtaaaagtatgtaaggtagag
gaggaacggcgggatcagatatgtgaacaatgcaggagtgggttgcatggggaagtaatg
ctgttgtgcgacagatgtaataaaggctggcatatatattgtttgtcaccacctttgaag
cgggttcccatcgggaattggtattgcttagattgtttgaattccgataaggataccttt
ggttttgtgcctggtaagcaattcgccttggaagctttccggcgtgtggctgaacgggcc
aagaagaagtggtttggatccacaccaacttcaagggtgcaattggagaaaaagttttgg
aaaattgtggaaggattggtgggggaggttgaagtaatgtatggcagtgatttagataca
tctgtgtatggaagtgggtttccgcgtgcaaatgatcagagaccagcatcaatagaagtt
gagaaatgggaggaatactgtgctagcccatggaatctcaataacttgcccaagctacaa
ggttcaatgcttcggactgttcacaatagtattgctggtgttatggtgccttggctctat
gttgggatgctgttttcatcgttctgctggcattttgaagaccactgtttttactcgatg
aattatctccattggggagagccaaagtattggtacagtgttcctggtaatgaagccaaa
gcttttgagaaggtaatgcggaagactcttcctgatttgtttgaggcgcaaccagatttg
ctttttcagcttgtaactatgctgaatccatctgtcttactagaaaatggtgttccagta
tacagtgtacttcaggaacctgggaattttgtcattacctttcctagatcttaccatgga
ggttttaatttgggtttaaattgtgctgaggcagtcaattttgctcctgctgattggctt
cctcatggtggttttggagcagagctatatcagctgtatcgcaaagctgctgttttatct
catgaggagcttctttgtgtggttgccaagagtgactttgatataaaagcatcaccttac
ttgaagaaagaattgcatagaatttatgataaggagaagactttgagggagcagctttgg
agaaatggcattgttagttcctctcccatgtctccacggaagcaccccgaatacgtgggt
actgaagaggatccaacatgcataatatgccaacagtatttgtatctctctgctattgtt
tgccgctgtagaccgtctgcgcttgtttgtcttgagcattgggaaaacctatgtgaatgc
aaaccaaacaggcatcgacttctttatcgttattcactggcagaattgaaggatttgccg
ctaatgacagataaacatgattctggaaatatagtccaagatagaaatttgagaagacag
ctctcatctggtgatgaattgggtgctttgaccaaaaaggtaaaaggtggtcatgtcact
ttttcccaactcgcggaagaatggcttctgagctcttgcaagatttttaaggctccatac
gataaggaggtttatgttaaggcattaaagaaagctgagcaatttctttgggcaggatca
gaaatggatccggtgcgagacgtgacaaagaacttgcttgaagctaagagttgggccgaa
ggagttagagattgtctttctaaagtggagaagtggtcagctcatcgcagctgcgataca
gaaaaagtgaaatgggatcatgttgacaatttactccatcgtgatccagtgccttgtaat
gagcctgcgcttgttcgattaaaggaatatgaaaaagaagcgagagccttgagtcaggaa
atcagttctgccctttcaaaaggctcacaactatctattgctgattgggaaatcttagcc
accagagtctgtgactttccgatatgtgtcacagaaagtgaaagactagtacagagttta
tcatctgcaaaggtgtgggtagaaaatgtaaggaaatgcgtctcagaaaaagcacagact
gcagttgaggcagatatcctttaccatttacagtcggagattttggagcttccccttcac
ccccctgaagttgaaatgctaatgggtttattaaggcaagttgagttatgccaggctcag
tgcaaggagatgctgaagggtccaataaatcttaagaaacttgaggcactttttcaagaa
tgggatgatttcactatcaacattccggagttaaaacttttgaagcaatatcgcagtgat
gctatctcgtggctttcccgtttgaatgatgtgctagtaaatattcatgaacgggaggat
caagaaaatgtggtgaacgagctgtcttccattcaaagggatggagaattgttgaaaatt
caagttaatgagtcatctcaggttgaggttgagttgaagaaggcttgttgcagggtaaag
gccctgaaggctcttggaagtaagatgtctttggacttcatccaacaactaatgatggag
gcaaccatgctgcagattgggaaggagaggttgtttggcaatatttctggagtactttca
gctgctatgttttgggaagaaagagcaacacgtattcttgctagtgaagctcagatgttt
gattttgaggatgctgtaaggacttctgaggacatatgtgctattctaccttctcttggt
gttgtcatggatgccttatcagttgccaagtcctggttaaagatgtctgagccattttta
gtgtctaatttatctttatcatgtgcctcaagttcgctgctgaaagttgacgctctggag
gagttagtttcacagtcaaagcttctgaagatatctttgagagaacgatcaatgcttcaa
tcagttttggataattgcattgaatggcagaatgatgcctgctctacactgcatgctgtg
gcatgcttcttaaataccgaaataactcataatgaaattgccagtggtcttctctcaaag
gtggagcagcaagttactgggatggagtcaatcataaaagctggcttatctcttggttta
gacttctctgagattccaaaactcgaagatgcttcttccactcttcgttggtgctttaag
gccctttctttctgttctgttgttccccagcttgaggatgttgagatgttgatggaggct
ggactccaccttcctgtgacgtatgcatctagttctttgtttagctcattaattgatggg
gtaaattggctgaagaaagctgcagaaatttgtgtaccatccaaccgtagaaaatttaag
ctgtgtgatgctgaagaagttctcgggcaatctccggtatttcttaagatcaaggtggcc
tttccagtgatggttagtcagctttcccatgcgattaggaaacataatttgtggcttgag
caagtgcatcttttcttcaagctaaagccttgcgacagatcatggattttatttctggaa
ctcaaggaacttgggagcacggatgcccttaactgccctgagctagatatggttttatct
caatttcacaaggttgagtggtggaagcagcgttgccataacattgcagggacctcagtt
ggagatgagaaatcactgcttcacagtttagtaaagataaaagatgcccttgatagatcc
ttgtacatatttagtctatcgaagggctgcaaggcaagagacctatgcatgtgctgctcc
agaaactttgaagatcagaagtttttaacttgttctatgtgcaatgactggtaccatctg
cagtgtaaaggacaaacactggctgatacaaatgatctggcattatgtatctgccattat
tgccacttttttgatagtgggaagatctctcaagatgtaggcggccctctgatatttgaa
gggaagcgcgctgaattgaataaactcgttgagcttctatctgatgctgtggatttctct
gtatggattgaggagagaagtatacttagtcaacttgtggagaaaactcttgcatgcaaa
gcatgcttagcagaagttgtggattttgcattaacttaccatgatgaagatctcagcata
gttgttaaaaagctatcgattgctatgaaggccatagaagtggcaggcgttttttatcat
cagggttgttgcaattttgagctggcattagcaagaaactcatggagagtcagagccaat
aaactttttggaggtccacaaaagcccctaatccaacagatgcagcgacatttgaaagag
gggctggctataagagtacctcccgaggatcacttctggcagaaacttgctgcagtgaaa
cacatttgcacccagtgggcagaaaaggccaagaaggtttcaatggactctggaacgctt
ggattggaaaacgtttttgaactcgttatggagggtgaaaacttgcctgttcaatacgaa
aaggagcttaagttattaagagatcgaactatgctgtactgcatctgccggaagccttat
gatcagagagctatgattgcttgtgataaatgtgatgagtggtatcacttcgactgcatt
aagctatccgcgacccccaaggtttatatatgccctgcttgtaagcttgaaacagaggac
ttgcactcgtctcccgtggtgactctagatggctcaattggctcgaaatgtgaggagcct
caaacgccttctccacgtcgccgagagtttaggcgcaaatcaagaaaacacaagtccagc
gcgaagcgaaaggtggtggtaacaactgcttgtcagagtagtaatgttttgaggcattct
agtgggattgagtgtttgttatggagtaaccgcaagccttttagaagagcagctagaaaa
cgttcacagatggacagtctttcacaattgttttacattcaaaagtaa

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