Rhododendron vialii: 131315684
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Entry
131315684 CDS
T09330
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rvl01009
]
131315684
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131315684
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
131315684
Protein phosphatases and associated proteins [BR:
rvl01009
]
HAD phosphatases
Fcp/Scp phosphatases
131315684
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
131315684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
131315684
NCBI-ProteinID:
XP_058200856
LinkDB
All DBs
Position
2a:20231381..20245885
Genome browser
AA seq
949 aa
AA seq
DB search
MYKSVVYEGDKVLGEVEVYPQNQNGGSFFLEKEIRISHFSQQSERCPPLAVLHTVTSSSP
GVCFKMEANLQSPQDSSLLNLLHSSCIRDNKTAVVSLTGEELHLVAMPSRKNDGRCLCFW
GFKVAFGLYNSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEALQRKLNSEADPQRI
SGILSEVKRYQEDKIILKQYAENDQVVDNGKVIKSQSEVVPALAANYQSIVRPLIRLQDK
NIILTRINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLD
PDSNLINSKELLNRIVCVKAGLRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHV
VPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFKDFDEGMLQQISEVMYEDDIKDIP
SPPDVSNYLVSEDDGSTLNANKDPLTFDGMADAEVERILKESISAIPTAVANLDPRFSPL
PYTVAASSISVPPSTFQGSSPFGSIQLQQVIPVVKPLIQVRPPEASLQSSPAREEGEVPE
SELDPDTRRRLLILQHGQDTRDHPLGEPQFPGRPPLQVSVPRVQARGNWFPMEEEMSPRL
LTKEFPMNSEAMHIEKHRPHHPPFVQKMESSISSDRVLENQRLPKEALQREDRLRMNHSL
STYHSFSGEDVPLGRSPSSRDLDVELGRVDLYAETPAGALQDIAIKCGTKVEFRSALASS
VDLQFSVEVLFAGEKIGEGIGRTRREAQHQAAEGSLMNLADKYMSRLKSDSGSVHGEGSW
FSSANDNGFISAVGSFGYQRLPKEQSPSLSNASDSSRVLDPRLEGSKKSIGSVSDLEELC
MMEGLAVAFQGQPPSSANPIQKNEVYAQVEVDGQVLGKGIGLTWDEAKMQAAENGLRSLR
SMPSQFSQKRHASPRAVQGMSNKRSKPEYSRVMQRMPSFARYPRNASVP
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatctgttgtgtacgaaggggataaagtactgggggaagtagaggtttatcct
cagaaccagaatggtggaagtttttttcttgagaaggagatacggatctctcacttctct
caacagagtgagaggtgcccgccactcgcggtgctacacaccgtgactagctcatccccc
ggtgtttgcttcaaaatggaggccaatttgcaatcaccacaggactcctcgctgctgaat
cttttacactcttcttgcatcagagataacaagactgcagtagtgtcactaactggtgag
gagctacatttggttgccatgccttccaggaaaaatgatggaaggtgcctgtgtttctgg
gggtttaaagttgcatttggactgtacaactcttgccttgtcatgttgaatcttagatgt
cttggaattgtatttgatcttgatgaaacactcatagttgcaaacacaatgcgctcattt
gaagatagaattgaggctctgcagcggaaattaaactccgaggcagatccgcaacgaatt
tctggtatactgtcagaggtcaagcgttatcaggaggacaaaattatattgaagcaatat
gcagaaaatgatcaggtagttgacaatggaaaggtgatcaaatcacagtctgaggttgtt
ccagctttggcagccaactatcaatctattgttcgccctcttatacggttgcaagacaaa
aacatcatcctgacccgtattaatcccttgattcgtgacacaagtgttcttgtgaggcta
agacctgcatgggaggacctccggagctacttgactgcaagaggtaggaagcgatttgag
gtttatgtctgcacaatggctgaaagagattatgcattagaaatgtggaggcttctagat
cccgactcaaacttgattaactccaaagagctattgaatcgtatcgtgtgtgttaaagct
ggcttgagaaaatcattgttcaacgttttccaagatggaatctgtcatcctaagatggct
ttggttattgatgatcgtttgaaagtatgggatgagaaagatcaacctcgggtgcacgtt
gttcctgcgtttgctccatattatgctcctcaagctgaagcaaataatgctgtgcctgtc
ctgtgtgttgcaagaaatgttgcctgcaacgttagaggtggttttttcaaagattttgat
gaaggtatgttacaacaaatatccgaagtaatgtatgaagacgatatcaaagatattcca
tctccaccagatgtgagcaattatttggtttcagaggatgatggttcaactttgaatgca
aacaaagatcctctaacatttgatggaatggcagatgccgaggttgaaagaatactaaag
gaatcaatttcagcaattccaacagcagttgctaacctagatccaaggttttctcctctg
ccatatacagtggcagcttcatctatctcagttccaccttcaacatttcaagggagttca
ccttttgggagtattcagctacaacaagtgattccagttgtcaaaccattaattcaagtc
cgccctcctgaagcaagcttgcaaagttctcctgccagggaagagggagaggtaccagaa
tctgaacttgatccggatacaaggaggaggcttcttattctacaacacggacaagacaca
agagatcatccattaggtgaaccccagtttccaggtagacctccactacaagtttctgtt
cctagggttcaagcacgtggaaactggtttcctatggaggaagagatgagcccaagacta
ctgaccaaggaatttcctatgaattcagaggcaatgcatattgagaagcaccgtccacat
catccaccttttgtccagaagatggagtcctctatctcatctgatagagttttagaaaat
caaagattgccaaaggaggctcttcaaagagaagatcgattgaggatgaatcattcactg
tcaacctatcattctttctcaggagaggacgttcccttgggtcgatccccatccagcagg
gatcttgatgttgaacttgggcgagttgatctgtacgctgaaactcctgccggtgcttta
caagatattgctatcaagtgtggcaccaaggtggagtttaggtcagctttggcttcaagc
gtggacctgcagttctctgttgaggtcttgtttgcgggagagaaaattggtgaaggaatt
ggtaggacaagaagggaagcccagcatcaggccgcagagggatccctcatgaatttggcc
gataaatatatgtcacgtctcaagtctgattctggttctgtccatggggaggggagctgg
ttttctagtgccaatgacaatggttttattagtgctgtgggttcttttgggtatcagcga
ttgcccaaggagcagtctccgtcactttcaaatgcatcagactcatctagggttctcgac
ccaaggctagagggctccaagaaatcaattggttcagtctctgatctcgaagaattatgc
atgatggagggccttgcagtagcttttcaaggtcagcctccatcttcagctaatccaatc
cagaaaaacgaagtgtatgcccaggtcgaagttgacggacaagttttaggtaagggaatc
gggttgacatgggatgaggccaagatgcaggctgctgaaaacggtctgcgaagtctgagg
tcgatgcccagtcaattttctcaaaaacgtcatgcttctccgagggcagtgcaggggatg
tctaataaacgatcaaagccagagtactcccgagttatgcagcgaatgccatcttttgcg
agatacccaaggaatgcctctgtaccctga
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