Rhododendron vialii: 131315874
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Entry
131315874 CDS
T09330
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
rvl
Rhododendron vialii
Pathway
rvl03022
Basal transcription factors
rvl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131315874
09124 Replication and repair
03420 Nucleotide excision repair
131315874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131315874
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131315874
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131315874
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131315874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
RHH_1
Motif
Other DBs
NCBI-GeneID:
131315874
NCBI-ProteinID:
XP_058201076
LinkDB
All DBs
Position
2a:complement(39658121..39660093)
Genome browser
AA seq
70 aa
AA seq
DB search
MVNAIKGLLISCDIPMAQFIINLDNSLPPSQKFIIHILDSTHLFVQPHVSEMIRRAIAEF
RDQNSYEKPP
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgctatcaaaggactgctcatttcctgtgacataccaatggcacaattcatc
atcaacttagacaactcactgcccccatcacagaagttcattattcacatcttggattct
actcacctgtttgtacaaccccatgtgagtgaaatgataagaagagccatcgcagagttc
agagatcaaaattcgtacgagaagcccccatga
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