Rhododendron vialii: 131316094
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Entry
131316094 CDS
T09330
Name
(RefSeq) tryptophan--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131316094
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rvl01007
]
131316094
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvl03016
]
131316094
Enzymes [BR:
rvl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
131316094
Amino acid related enzymes [BR:
rvl01007
]
Aminoacyl-tRNA synthetase
Class I (G)
131316094
Transfer RNA biogenesis [BR:
rvl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
131316094
Prokaryotic type
131316094
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Glyco_hydro_114
Motif
Other DBs
NCBI-GeneID:
131316094
NCBI-ProteinID:
XP_058201350
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All DBs
Position
2a:complement(35707416..35720932)
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AA seq
419 aa
AA seq
DB search
MSRSVLSHFLSLSNASPRVSSSTIRSCSIDASRFLRRCGTIPQRRLPISYGGVAGSRCYC
SLSVSNPVGPAADSGSVKKRIVSGVQPTGSIHLGNYLGAIRNWVLLQDAYETFFFIVDLH
AITLPYDPQELSRVTRETAAIYIACGVDTSKACIFVQSHVRAHAELMWLLSSATPIGWLN
RMIQFKEKSRKAGDENVAVALLTYPVLMAADILLYQSDFVPVGEDQKQHLELTRELAERV
NYLYGGRKWKKLGGRGGAVFKVPEALVPPAGARVMSLTDGLAKMSKSAPSDQSRINLLDP
KDVITNKIKRCKTDSFSGIEFDNPDRPESNNLLSIYQLMTGKTKQEVAHECQDMNWGTFK
NVLTDALIDHLLPIQVRYKEIIDDTGYLDRVLVEGATKATDVADVTLNNVYQAMGFLKR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctcagttctctctcacttcctctctctctccaacgcttctcctcgcgtctcc
tcctctaccatcaggtcgtgcagcatagacgcgagtagattcttgagaagatgtggaacc
attccccaacgccgtcttccgattagttacggcggcgtcgcaggttctcggtgctattgc
agcctctcggtctccaaccctgtgggccccgcggcggattccggctctgtcaagaagagg
atagtgtctggtgttcagccgacaggatctatacacctcggcaattatcttggtgccata
agaaattgggtcttacttcaggatgcatatgagactttcttcttcattgttgacctgcat
gcgataactctgccttatgatccacaagaattatctagagtaacaagagaaacggctgct
atttatatcgcatgcggtgttgatacttccaaggcttgtatctttgtgcagtctcatgtt
cgtgctcatgccgaactgatgtggctacttagttctgctaccccaattggttggctgaac
cgaatgattcagtttaaagagaaatctcgcaaggcgggtgatgaaaatgttgcggttgct
cttcttacttatcctgtccttatggcagccgatattcttttgtatcagtctgactttgtc
ccagttggtgaggatcagaagcaacatttagagttgactcgagagctggctgagcgtgtt
aattatttatatggtggaaggaagtggaagaagttaggagggcgaggtggtgcagttttt
aaggttcctgaggcccttgttccgcctgctggagcacgggtgatgtccctcactgacggg
cttgcaaagatgtccaaatctgcaccttccgaccaatctcgaattaatttgcttgaccca
aaggatgtaataacaaacaagataaaacgttgcaagactgactcattttctggcatagaa
tttgacaatcccgacagacctgaatccaacaatctgctgtcaatatatcagctcatgact
ggcaagacaaaacaggaagttgcacatgaatgccaagatatgaactggggtacattcaag
aacgttcttacagatgctttgattgatcatctacttcccatccaggttcgctacaaggaa
attatcgatgatacagggtatttggatagagttttggtagagggtgccactaaagctaca
gatgtggcagacgttactctcaataatgtctaccaagcaatgggattcctgaagagatga
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