Rhododendron vialii: 131316186
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Entry
131316186 CDS
T09330
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00040
Pentose and glucuronate interconversions
rvl01100
Metabolic pathways
Module
rvl_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131316186
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131316186
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
pAdhesive_6
Motif
Other DBs
NCBI-GeneID:
131316186
NCBI-ProteinID:
XP_058201464
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Position
2a:complement(35664091..35668409)
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AA seq
392 aa
AA seq
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MVQSMASLILAPLVVFLYLSLATAKHWDVVSLGAKGDGRTDSTNPFLKAWAAACGSAQPA
TIYVPPGRYLLGQAKFYGSQCKNSHITIRIDGTLVAPSDYRVLGNADNWLLFEQVSGVSI
YGGTLDGQGSGLWACKASGYGCPQGATTLEFSKSNNILISGLTSVNSQMFHTVIYSCTNV
KVQAMKISASANSPNTDGIHVESSSTVSIYNSMIATGDDCISIGPGTTNLWIENIACGPG
HGISIGSLGKEFQEAGVRNVTVSRVTFTGTQNGVRIKTWAKPSTGFVTGVVFQHATMVNV
QNPVIIDQNYCPNNEGCPNQASGVRISDVTYQDIHGTSATTVAVNFDCSKEYPCNRITLE
DVNLSYGNKQSQASCANVEGSASGLVTPSSCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggtacaatccatggcttctcttatcctcgcacccctagtcgtattcttatacctatca
ctagcaacagcaaaacactgggacgtcgtaagtttaggagccaaaggagatggacggaca
gactcaaccaatcccttccttaaagcgtgggccgcggcttgtggctcggcgcagccagcc
acaatctacgttcctccgggaaggtacttgctcggccaggcaaaattttacggcagccaa
tgcaaaaacagccacatcaccattcgtatcgacgggacactcgtggctccctcagactac
cgcgttctaggaaacgccgataactggctcctgtttgaacaggtgagcggggtttcgatc
tacggtggaaccctggacggccaagggtccggtttgtgggcttgcaaggcctccggctat
ggttgtccccaaggagctacgacactagaattcagcaaatcgaacaacatcttgatcagc
ggactaacatcggtgaacagtcaaatgttccacacggttatctatagctgcactaatgtt
aaggtacaggcaatgaagatatcagcatcagcgaatagcccaaacacggacggaattcac
gttgagtcctcatcgaccgtctcgatttacaattctatgattgctaccggggatgactgc
atctcgatcggtccaggcactaccaatttgtggattgagaacattgcctgcggccctggc
cacggtattagcattggaagtttgggaaaggagttccaggaagctggagtgcgaaacgtg
actgtttccagagttacgtttacgggcacgcaaaatggagtgaggataaagacttgggcg
aagccgagcacgggcttcgttaccggtgtcgtcttccagcatgctactatggtcaatgtc
cagaatcccgtaatcatcgaccaaaattattgcccgaataacgaaggttgccccaatcaa
gcttcgggcgtaagaattagcgacgtgacgtaccaggacatacacgggacatcagcgaca
acagtggctgtgaatttcgattgcagtaaagaatacccatgcaacaggataacactggaa
gacgtgaacctcagctacgggaataaacaatcccaagcttcttgtgccaacgttgaagga
agtgcttctggcttggttacaccctcaagctgcttgtag
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