KEGG   Rhododendron vialii: 131316340
Entry
131316340         CDS       T09330                                 
Name
(RefSeq) LEC14B homolog isoform X1
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
rvl  Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rvl04121]
    131316340
Ubiquitin system [BR:rvl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     131316340
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_RIG_2nd WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 DUF4221 WDR54
Other DBs
NCBI-GeneID: 131316340
NCBI-ProteinID: XP_058201646
LinkDB
Position
2a:1526741..1533902
AA seq 472 aa
MTRPRKDRSTCEGGSAPDGVGTSRGHNVPSSYLDHEVAQLTKLRSEPNGLLSRVGLGKSL
LPVSPVMMLAGRESNYSGRGRFSSADSCHVLSRYLPINGPRRIDQMNSCAYVSQFSADGS
LFVAGFQESEIRIYNVNGGWEVQKDILAKSLRWTITDASLSPDQHYLVYASMSPIVHIVN
VSSSVTKSHANVTEIHEGLDFSVGDDIEGERSFGIFSVKFSTDGRELVAASSDDSIYVYD
LAANKLALHIPAHKSDVNSVCFADESGNVIYSGSDDNLCKVWDRRCFVTTGQAAGVLTGH
LEGITFIDSRGDGRYFISNGKDQSIKLWDIRKMSSKVTCPNPRLRNEWDYRWMDYPPRAR
NRKHPNDQSLATYEGHSVLRTLIRCYFSPAYSTGQKYIYTGSSDSSVYIYDVVTGAQVAR
LEYHDDPVRDCSWHPFYPTLVSSSWDGVIAEWEFSGRVPLKPPSRRRRRHFY
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgactaggccgcgaaaggacagaagcacctgtgaaggtgggagtgcacccgatggagtg
ggtactagtcgagggcacaatgttccatcaagttatctagatcatgaagttgctcaactc
acaaagcttaggtcagaacccaatgggcttctgagccgggtggggctgggaaaatcgctg
ttacctgtttcccccgtgatgatgttggctggccgagaaagtaattattcagggaggggt
agattctcatcagctgatagttgtcatgttctaagccgatatttgcccatcaatggaccc
cgaagaattgatcaaatgaacagctgtgcatatgtttcacagttttctgctgatggttct
ctttttgttgcaggattccaggaaagtgaaattaggatatataatgtcaacggtggatgg
gaagtccaaaaggatattttagcaaaaagtttgcgatggacaattactgatgcatctctt
tcaccagatcaacattatctggtttatgccagtatgtcgcctattgtccatattgtcaat
gttagctcgtctgtgacaaaatctcatgcaaacgttacggaaattcatgagggtctggat
ttttcagttggtgatgatattgagggtgaacgctcttttgggatattctctgtaaaattt
tcaacagatgggcgggagcttgtagctgctagtagtgatgattccatatatgtctatgat
cttgcagcaaataagcttgctctccatattccagcacacaagtctgatgtcaactctgta
tgttttgctgatgaaagtggcaatgtcatatattcggggagtgacgataacctgtgtaag
gtatgggacagacgctgttttgttacaacagggcaagcagctggagtcctaacgggacat
ctagaaggcatcactttcattgacagtcgcggtgatggccgttactttatctcgaatggg
aaagatcagtccatcaaactttgggatatccggaaaatgtcctctaaagtcacttgtccg
aatccgaggctgaggaatgagtgggattataggtggatggactacccaccccgtgctaga
aataggaagcatcctaatgatcaatcattggctacatatgaaggtcattcagtcttgcgt
acactcatacgctgttacttctccccagcatatagcactggtcaaaagtacatctacacg
ggatctagtgattcttctgtttatatctatgatgtggtgaccggagctcaagtggctaga
cttgagtaccatgacgatcctgttagagattgtagttggcacccattctacccgactctc
gtcagctcttcatgggatggtgtcattgcagaatgggagttttcagggagagttcccttg
aagccaccgagtagaaggcggagacgacatttctattga

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