Rhododendron vialii: 131316399
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Entry
131316399 CDS
T09330
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Pathway
rvl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131316399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131316399
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131316399
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
U-box type E3
131316399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
Neurochondrin
MLKL_N
HEAT_2
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
Arm_2
KAP
HEAT_EZ
zf-C3HC4_2
MCAfunc
DUF6833
zf-C3HC4
zf-NOSIP
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
131316399
NCBI-ProteinID:
XP_058201734
LinkDB
All DBs
Position
1a:complement(41789230..41794687)
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AA seq
647 aa
AA seq
DB search
MEDEKGALVQKLIDVVNEISVVSDFRCTVKKQYCNLARRLKLLTPMFEEIRDIKEPVPEE
SFRALSSLKEALESARNLLRFASEGSKIYMVLEKDDIMNRFQEVTTCLEQALGGIHYERL
DISDEVKEQVELVQSQFVRAKGRVDVPDLELYEDLLFLYNKNNDVSADPAVLRRVAEKLQ
LMGVAELTQESIALHEMVSASGDPGESIEKMSMLLKKIKDFVQTENPNLDSPSRGNSIPS
SCSGQVSTEEAHKSIIIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLDAGHETCPK
TQQALSSTALTPNYVLRSLIAQWCEANGVESPKRASSRPNKTSSAFSSAERTKIETLLHK
LTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVDLLSTPDSRTQEHAVTALLN
LSICEDNKGSIITSGAVPGIVLVLKKGSMEARENAAATLFSLSVVDENKVTIGSSGAIPP
LVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPQGGMVDEALAI
LAILSSHPDGKAAIGAAEAVPVLVEVIGSGSPRNKENAAAVMVHLCSGDQKYLVEAQELG
VTGLLVDLAQNGTDRGKRKAVQLLERMNRFAEQQKQAQAQAQAEAQN
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagaaaggagcactagtccaaaagctgatcgacgtcgtcaacgagatttcg
gtggtatcggatttcaggtgtacggtgaagaagcagtactgcaacctggcgaggcggctg
aagctgctgactccaatgttcgaagagattcgcgacatcaaggagccggtccccgaggag
tcgttccgagccctgagctcgttgaaggaggccctggaatcggccagaaacttgctcagg
tttgctagcgaagggagcaagatttatatggtcctagagaaggatgacattatgaataga
ttccaagaagtgacaacttgtttggaacaagctctaggtggaattcactatgaaaggctt
gacatttcagatgaagtcaaggaacaggttgaacttgtacaatctcaattcgtaagagca
aaaggaagggtcgatgtacccgatcttgagttgtatgaggatctcttgttcctttacaac
aagaacaatgatgtatcagctgatccagctgtcttaagaagagtagctgaaaaattacaa
ctgatgggggtagctgagctcacccaagaatcaatagccttgcatgagatggtttctgcc
tctggagatccaggagagagcatagagaagatgtcaatgctactgaagaaaattaaggat
tttgtgcagactgagaatcctaacttggattctccgtcaaggggaaactctattccttca
agttgcagtgggcaagtgtccacagaggaggctcacaaatccattatcataccagatgat
ttccggtgtccaatatccctggaattgatgagggatcctgtcattgtctccactgggcag
acgtatgagcgatcctgcattgagaaatggctggacgcagggcatgaaacatgtccaaag
acacaacaagccctcagtagcactgcccttacacccaactatgtccttcgtagcctcata
gcccaatggtgcgaggcaaatggggtcgaatcgccaaaacgagcaagctctcgaccgaac
aagacttcatcggctttctcatctgctgaacgtaccaagatagagactctactgcacaag
ctcacatccggtaacccagaagaccagcgatccgcagcaggcgaaattcgtcttcttgcc
aaacgcaatgcagataaccgtgtcgccattgcagaggctggggccatccctctgcttgtc
gaccttctctccacacctgattcgcgcacccaagagcatgcggttacagcactcctcaac
ctttccatatgcgaggacaacaaaggaagcatcataacatctggggcagtgcctggaata
gtcctcgtgctgaaaaagggaagcatggaagcgcgtgaaaatgcagcagccaccctattt
agcctctcggtcgtggatgaaaataaggttacaataggcagctctggtgcgatcccacca
cttgtaacgcttcttagcgaaggtacccaaagggggaagaaagatgctgcaacggcactt
ttcaacttgtgcatttaccaagggaacaaaggaaaggcagttagggctggagtggtgccc
acattgatgcgcctacttacggaaccacaaggtggaatggtggacgaggcgctagctata
ctggcgatactctctagccatccggacggcaaagcagccattggagctgcggaggctgtg
ccggttttggtagaggttattggaagtgggtcccccaggaacaaagagaatgctgcagct
gttatggttcacctctgttctggagaccagaaatatctggttgaggctcaggagcttgga
gtgacgggtctgctagttgatttggcacaaaatggaacggataggggaaagagaaaggcc
gtgcagttgcttgagagaatgaatagattcgccgagcagcagaagcaggcccaggcccag
gcccaagctgaggctcaaaactag
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