Rhododendron vialii: 131316477
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Entry
131316477 CDS
T09330
Name
(RefSeq) exosome complex exonuclease RRP46 homolog isoform X1
KO
K12590
exosome complex component RRP46
Organism
rvl
Rhododendron vialii
Pathway
rvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131316477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131316477
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131316477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
131316477
NCBI-ProteinID:
XP_058201842
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Position
2a:36406445..36413809
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AA seq
243 aa
AA seq
DB search
MEIDRADGRTPNQLRPLACSRGILNRAHGSANWSQGETKVLAAVYGPKAGTKKNENPEKA
CIEVIWKPKTGQIGKPEKEYEMILKRTLQSICLLTVNPNTTTSVIVQVVNDDGALLPCAI
NAACAALVDAGIPLKNLAVAICCCLTDSGCVILDPNKLEEQKMKAFVYLVFPNSILSVLP
EGSSQVGGEPVEHGIITSVTHGVMSVDDYLHCLQRGRAASAKLSDFLRRNLQSHSPGDLS
KAG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagatcgagcggacggtcgtacaccgaaccagctgagaccactcgcttgttct
cgtggtattctgaatcgcgctcacggctccgccaattggtcccaaggggagacgaaagtt
cttgccgcagtttatggaccgaaagcgggaacgaagaagaatgaaaaccctgaaaaggct
tgcattgaagttatttggaagcccaagactgggcagattggtaaaccagagaaggagtac
gagatgatattgaaaaggactttgcaaagcatctgccttctgactgtcaatccaaatacg
acaacctcagttatagttcaggttgtcaatgatgatggtgcccttctcccctgtgctata
aatgctgcatgtgctgcccttgtggatgctggaattccgttgaagaatcttgcagttgca
atatgttgttgtctgacagatagtggatgtgttatactggaccccaacaagctagaagag
cagaaaatgaaggcatttgtgtacctagttttcccaaactcaattctgtccgtccttcca
gaaggatcatcacaggtgggaggagagccagtggaacatgggattattacatctgttaca
catggtgtaatgtcagtggatgattatcttcactgtctacaacgaggacgtgcagccagt
gcaaaattgtctgattttctcaggagaaatttgcagtcacattccccaggtgacttgtcc
aaggctgggtga
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