KEGG   Rhododendron vialii: 131316799
Entry
131316799         CDS       T09330                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
rvl  Rhododendron vialii
Pathway
rvl03020  RNA polymerase
rvl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131316799
  09124 Replication and repair
   03420 Nucleotide excision repair
    131316799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rvl03021]
    131316799
   03019 Messenger RNA biogenesis [BR:rvl03019]
    131316799
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131316799
Transcription machinery [BR:rvl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     131316799
Messenger RNA biogenesis [BR:rvl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     131316799
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131316799
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Vg_Tdu
Other DBs
NCBI-GeneID: 131316799
NCBI-ProteinID: XP_058202233
LinkDB
Position
1a:42968191..42974740
AA seq 174 aa
MFFHMVLERNMQLHPRHFGRDLREKLVAKLMKDVEGTCSGRHGFVVGITGIESVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDRSVKIEKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVLGGDQ
NT seq 525 nt   +upstreamnt  +downstreamnt
atgtttttccacatggttttggagcgaaacatgcagctccacccccgccacttcggccgc
gacctccgagaaaagctcgtcgccaagctcatgaaagacgtcgaagggacttgcagcggt
cgacacgggttcgtggtggggattactggtatcgagagcgtcggaaaagggctaattcgg
gacggcactgggttcgttaccttccctgtgaagtaccagtgcgttgttttccgaccattc
aaaggagagatcttagaagctgttgttaccatggttaataaaatgggatttttcgctgaa
gcagggccagttcaaattttcgtgtcgaatcatttgatacctgatgatatggagttccaa
tctggagatatgcctaattacacaacttcagatagatcagtcaagattgaaaaggaaagt
gaagtacggctaaagattattggaactcgggtggatgctacagagatattctgcattggt
acaataaaggacgacttcttgggtgttcttgggggtgatcagtga

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