Rhododendron vialii: 131316940
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Entry
131316940 CDS
T09330
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131316940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131316940
03036 Chromosome and associated proteins [BR:
rvl03036
]
131316940
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131316940
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131316940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
131316940
NCBI-ProteinID:
XP_058202490
LinkDB
All DBs
Position
2a:47423217..47435570
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AA seq
1039 aa
AA seq
DB search
MFGSTNPFGQSSNGPFGSQSIFGQTNNASSNPFAPKPFGSTTPFGSQTGGSIFGGTSTGV
FGATQSSAPSTPAFGASPSPAFGSSVPAFGASSTPAFGSSSSSFGSGSVFGQKPVFAGFG
SSTTQTNPFGGTFQQSQPAFGSSLFGSSTPFGASSQPAFGTSSTPAFGSTSTPAFGATSS
PNFGVTSTPAFGSTASPAFGSTGSAFGVSSAPVFGSGGAFGASSTPVFGSTSTQAFGAPS
TPAFGASSSPAFGASSTPAFGASSAPSFSFGSTPAFSQSVSAFGSSPFSTSTSPFGAQSS
SFGAQATTPTFGSAGFGQAGFGGQRGGTRVAAYAPTAELDSGTGSQPAGKLESISAMPVY
KDKSHEELRWEDYQLGDKGGPAPAGQSTGAIGFGAATTQSNPFASSSAFGQSSANPFSSP
TPSNPFAPKTPAFGSTGFGSSSAAFGSSPFGGSSTSNPFGSTSSGTTSIFGASGSAFGAN
TSPSLFGSASSSAFGTSTSIFGSASAPGTASAFGSGLSFANTQSSPLFQSSTPSLGQTNS
LFGQTAPAFGQNTQAFGQSSLFNTPSTGFGANLFSSTPSLLSTSNPMGFGQTTPSLSTPF
QSVQPAQTTGSLGFNNFGQTQQGGTGTFGSMSTMFGPNNFGQLSATQSSAVAQALPVNNP
FGTLPAMPQMSIGRSGTAPSIQYGISSLPVVDKPAPVRISSLLTSRHLSQRRIRLPARKY
HPQNDGPKVPFFSDDEETPSTPKADALFIPRENPRALVIRPLEQWPPRKNADKSSPFKDT
SSSAFENGKIAEADSTSLNGSSAKDKNKEPVANGSVVKERVHPDKVDQKPNGNHDDHSNG
QKEDSYITLTGHRAGEAAIVFEHGADIEALMPKLRHSDYYTEPRIQELAAMERAKPGFCC
RVKDFVVGRHGYGSIRFIGETDVRRLDLESLVQFNNREVIVYMDESKKPPVGQGLNKPAE
VTLLNIKCVDKRTGTHYTEGPKIDRYREMLKRKAEDQGAEFVSYDPIKGEWKFRVRHFSK
YRLGDEDEDNWYMHAAPGC
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcaactaacccttttgggcagtcatcaaatggcccattcgggtcccaatcc
atttttgggcaaactaataatgcaagcagcaatccgtttgctcccaaaccctttgggagt
acaactccttttggttcgcagacagggggttccatttttggtggcacttcaaccggggta
tttggtgcaacccaatcttctgcaccttccacgccagcttttggtgcttcaccctcccca
gcttttggtagttccgtacctgcttttggagcttcgtcaactcccgcgtttggtagttca
tcatcttcatttggaagtggttctgtttttggacagaagcctgtttttgcaggctttggg
tcaagcactacgcagacaaatccgtttggaggcacattccaacaatcacagccggcattt
gggagcagcctttttggttcttctacaccatttggtgcatcaagtcaacctgcatttggc
acttctagcactccagcctttggttcaactagcacacctgcctttggtgccacaagttcc
ccaaattttggggtgacaagcaccccggcttttggttccactgcaagtcctgcattcggt
agcacaggcagtgcatttggtgtctcaagtgcacctgtctttggatctgggggagcattt
ggggcttcaagcactcctgtctttggatcaacaagcacccaagcctttggcgcgccaagc
actccagcatttggtgcatcaagcagcccagcatttggtgcttcaagtactcctgctttt
ggtgcttcgagtgctccatcatttagttttggctccactcctgcgtttagccaatcagtt
tctgcttttggaagcagcccatttagtacttccacatcgccctttggagctcagagttct
tcatttggagctcaggctacaactccaacatttggtagtgctggttttgggcaagctggt
tttgggggtcaacgtgggggaactagggtggctgcttatgcaccaacagctgagttagat
agtggcactggttcacagcctgctgggaagttggagtcaatatctgccatgccagtatac
aaagacaaaagccatgaagagctgagatgggaggactaccagttgggtgataaaggagga
ccagctcctgctggacagtctactggtgctattggattcggtgctgctactacacagtca
aacccttttgcttcttcatcagcatttggtcagtcatctgcgaatccattttcatcccca
acaccttccaatccctttgctccaaaaactccagcctttggtagtacaggctttggatca
tcctctgcagcctttggttcttcaccctttggtggttcatccacttccaatccttttggt
tctacttcatctggaacgacttccatatttggcgcatcgggttcagcatttggagccaat
acatcaccgtcgctgtttggttcagcaagctcatctgcttttggaacatcaacatctatt
tttggttctgcatcagctccaggaacagcttcagcatttggttctggtttaagttttgct
aacactcaatcgtccccactattccagtcatctacgccttcacttggacaaacaaattcg
ctctttggacagactgcccctgcttttggacagaatacccaagcctttggtcaatcaagt
ttatttaatacaccttctacggggtttggggccaacttgttctcaagcactccgtcgctg
ctatctacaagcaatcctatgggatttggtcaaacaactccctcactttccactcctttt
cagtctgtccaacctgctcagacaactggctcattgggtttcaacaacttcggtcagaca
caacaaggtggtacaggcacttttggaagcatgtcaaccatgtttggtccgaataatttt
ggacaattgtctgctacccagagctctgcagttgcccaagcgctccctgttaacaatcca
tttggaactctacctgcaatgcctcagatgtcaattggtcgttcagggactgcaccttct
attcaatacggaatttcttccttgcctgtcgttgacaaaccagctcctgttagaatatca
tctttgttaacttctcggcatctttctcaaaggcggattaggttgcctgcaaggaaatat
catcctcaaaacgatggtccaaaggtgcccttttttagtgatgatgaagaaacacctagc
acgcccaaggcagatgctcttttcattcccagggagaatcctagagctcttgttatccgc
cccttggaacaatggcctcccaggaaaaatgcagacaaatcatctccatttaaggacaca
tcttcttcagcatttgagaacggtaaaattgctgaagctgattctacttctttgaatggc
tccagtgcaaaggataaaaataaagagccagttgcaaatggcagcgttgtgaaggaacga
gttcatcctgacaaggtggaccaaaaacccaatggaaaccacgatgatcattccaacggc
cagaaagaggactcctatattactcttactgggcacagagctggtgaagcagcaattgtg
tttgagcatggggctgacatcgaggcgctgatgcctaagctccgtcactctgactactac
acagagcctcgaattcaagaactggctgcaatggaaagggccaaaccaggattctgctgt
cgtgtcaaggattttgtggttggacgccatggctatggtagtatcaggttcattggggag
actgatgtgaggcgtcttgatcttgaatctctcgtgcaatttaacaatcgcgaggttatt
gtctacatggatgagagcaagaagcctcctgttggacagggtctcaacaagcctgctgag
gtaacacttctcaacatcaaatgtgttgacaaaaggactgggactcactatacagagggg
ccaaaaattgatagatacagggagatgctcaaaagaaaggccgaggatcaaggtgctgag
tttgtttcctatgacccgatcaaaggagaatggaaatttagggtcagacatttcagcaag
tacagacttggagatgaagatgaagataactggtatatgcatgctgctcctggatgctga
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integrated database retrieval system
