Rhododendron vialii: 131317696
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Entry
131317696 CDS
T09330
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
rvl
Rhododendron vialii
Pathway
rvl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131317696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131317696
03036 Chromosome and associated proteins [BR:
rvl03036
]
131317696
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
131317696
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
131317696
RSF complex
131317696
WICH complex
131317696
B-WICH complex
131317696
NORC complex
131317696
BRF complex
131317696
NuRF complex (fruit fly)
131317696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
AAA_14
ToxN_toxin
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
131317696
NCBI-ProteinID:
XP_058203240
LinkDB
All DBs
Position
2a:complement(1127380..1136023)
Genome browser
AA seq
1065 aa
AA seq
DB search
MARPSKSSEEEDASNGSNSSSEEQINDQINEEEDEEEIEAVARAGDDDEDNDDGNGDDED
EEEVFEEKAAGGEIGKREKARLREMQKLKKQKIHEILSAQNAAIDADMNNKGKGRLKYLL
QQTEIFAHFAKGDQSTSQKKSKGRGRHASKVTEEEEDEEYLKDEEDGLSGTGNTRLVAQP
SCIEGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLNEFRGITGPHM
VVAPKSTLGNWMNEIKRFCPILRAIKFLGNPDERKHVRENLLVAGKFDVCVTSFEMAIKE
KSALRQFSWRYIIIDEAHRIKNENSLLSKTMRLFKTNYRLLITGTPLQNNLHELWSLLNF
LLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILK
VGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTG
DHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLLFRGYLYCRIDGNTGG
DDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAQDRAHR
IGQTKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFG
AEMVFSSKDSTITDEDIERIIAKGEEATAELDAKMKKFTEDAIKFKMDDSADLYDFGDEK
DDNKLDFKKIVTDNWVEPSKRERKRNYSESEYFKQTMRQSGPARPREPRIPRMPQLHDFQ
FFNTQRLSELYEKEVRYLMQTNQKNQLKDTTIDMDEPEELGDPLTAEEQEEKERLLEEGF
STWSRRDFNTFIRACEKYGRNDVKSIAYEIEGKTDEEVERYAKVFKERYKELNDYDRIIK
NIERGEARISRRDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVNKL
GYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVERENQEFDERERQARKE
KKLAKNTTPSKRALARQATESPPTIKKRKQLLMDDYVNSVDSFPL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggccctcgaaatcatcggaagaagaagacgcatccaacggatcaaattcctca
tccgaagagcaaatcaacgatcagatcaacgaggaggaagacgaggaggagatcgaggcc
gtcgcaagggccggggacgacgacgaagataacgacgacggtaacggcgatgacgaggat
gaggaggaagtattcgaagagaaggctgcgggtggtgaaattggaaagcgggaaaaggcc
aggctaagagaaatgcagaagttgaagaaacagaagattcatgaaattctgagtgcacaa
aatgctgctattgatgcagatatgaacaacaagggaaaggggcggctcaagtatctcctg
cagcagacagagatatttgctcattttgccaagggtgatcaatctacctctcagaagaag
tcaaagggaaggggtcgtcatgcatcaaaggttactgaggaggaagaagatgaagaatac
ctcaaggatgaagaagatggtctctctgggactggaaatactcggctggtggctcaaccc
tcttgtattgaaggaaagatgagggactaccaacttgctggattaaactggctcatacgc
ctatatgagaatggtataaatgggatccttgcagatgaaatgggtcttggcaaaacattg
caaacaatctccttgttggggtatctgaatgaattcaggggaataactggtcctcacatg
gttgttgctccaaagtctacgctgggcaactggatgaatgaaatcaaacgtttctgccca
attctgcgagccataaagtttcttggaaatcctgatgaaagaaagcatgtacgtgaaaat
ttacttgttgctgggaagtttgatgtgtgtgttaccagttttgaaatggccattaaggag
aaatcagccttgcgccaatttagttggcgatatataatcattgacgaggctcatagaatc
aagaatgagaattcacttctttcaaagacaatgagacttttcaagactaattaccgcctc
cttattacgggtactccgctgcagaacaatcttcacgagttgtggtctcttctgaacttt
cttttgccggagatatttagctcagctgaaacttttgatgaatggtttcaaatatctggt
gaaaatgaccagcaggaggttgttcaacaacttcataaggtcctccggccgttccttctt
cggcggttgaagtcagatgttgaaaaaggtttgcctcccaagaaggaaacgatactcaaa
gttggaatgtcccaaatgcagaagcagtactataaggcgttgttgcagaaagatcttgag
gttgtaaatgccggtggagagcggaagcgtcttctgaacatagcaatgcagctgcgtaaa
tgctgtaatcacccgtaccttttccaaggtgctgaacctggccctccttatacgacagga
gatcatcttattactaatgctgggaaaatggttcttttggataagttgcttcctaaacta
aaagaacgtgattcaagggtccttattttttcacagatgacaaggcttctggatattctg
gaagactacttattatttcgtggttacctgtattgtcggattgatggcaatactggtgga
gatgatcgcgatgcttcaattgaagccttcaataagccaggaagtgagaaatttgtcttc
ttactatcaaccagggctggaggccttggcattaatcttgcaactgcagatgtagtgatt
atttatgacagtgactggaacccacaagtcgacttgcaggctcaggatcgtgctcacagg
attgggcaaacaaaagaagttcaagtgttccgtttttgtaccgagtatacaattgaggaa
aaagtgattgagagggcttataaaaagcttgctttagatgctttggtgatccaacaaggg
agattggcagagcagaagactgttaacaaagatgagctgctccaaatggtgaggtttggt
gctgaaatggttttcagttcaaaggacagtacaatcactgatgaggatatagagcgaatc
attgctaaaggagaagaggctacagctgagcttgatgctaagatgaagaaatttactgaa
gacgcgatcaaattcaaaatggatgactctgctgatctatatgactttggggatgaaaaa
gatgacaacaagttggacttcaagaaaattgtcactgacaactgggtcgaaccatcaaaa
agggagaggaagcgcaattactccgaatccgaatacttcaagcaaacaatgcgccaaagt
ggtccagctagaccaagagagcctcgaattcctcgcatgccccagttgcacgattttcag
ttttttaacacgcaaaggttaagcgagttgtatgaaaaagaagttcgctatctcatgcaa
acaaatcaaaagaatcagttaaaagacaccaccatagacatggatgagccagaagagttg
ggagaccccttgactgcggaagagcaggaagaaaaggagcggctattggaagagggattt
tctacatggagtagaagagattttaatactttcattagagcttgtgagaagtatggtcgg
aatgatgtaaaaagtatagcctatgaaattgaagggaagacagacgaggaagttgaaaga
tatgcaaaagtttttaaagaaagatacaaagagttgaatgattatgataggatcattaag
aacattgaaagaggggaggctagaatctctcgcagggatgagatcatgaaagcaattggg
aagaagttggatagatacaagaatccatggcttgaattgaaaattcagtatggtcagaac
aaaggaaagctgtacaatgaagagtgtgatcgtttcatgatttgcatggttaacaagctt
ggctacggaaactgggatgagctaaaggctgcatttcgcacatcgcctttattccgtttt
gactggtttgttaagtctcgaacaactcaagagcttgcaaggagatgtgatacgcttatt
cggttggtagagcgggaaaaccaagaatttgatgaaagagagagacaagcccgtaaagag
aagaagcttgcaaagaacacgacgccatcaaagcgggcactagcaaggcaggcaacagag
agccctccaactataaagaagcggaagcaattgttgatggatgactatgtgaactcggta
gacagttttcccctatga
DBGET
integrated database retrieval system
