Rhododendron vialii: 131317742
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Entry
131317742 CDS
T09330
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00531
Glycosaminoglycan degradation
rvl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
131317742
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rvl00536
]
131317742
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
131317742
Glycosaminoglycan binding proteins [BR:
rvl00536
]
Heparan sulfate / Heparin
Enzymes
131317742
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Leu_Phe_trans
Motif
Other DBs
NCBI-GeneID:
131317742
NCBI-ProteinID:
XP_058203311
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Position
2a:complement(40438067..40445447)
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AA seq
537 aa
AA seq
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MGSPPNHLGLFLWLYYLAISGSKFVASQSNTGAPAVVQGTAYISGTISVGTTDVDFICAT
LDWWPPQKCDYGTCSWSTASLLNLDLTDIVLLNAIKAFSPLKIRIGGTLQDNVRYQTVGD
QTPCTGFVQNSADPFGFTQGCLPMARWDALNVFFKEAGARIIFGLNALTGRTVGSDGTAT
GAWNSANAESLIKYTINKGYTIDGWEFGNELSGSGIVASVAADQYAADTISLQNLVQKHY
RGFTLTPIVLGPGGFFDATWFPEYIQKSQNSLQVVTHHIYNLGAGVDDHLVDKILDPNYL
GGESQTFSSLQTILKNSGTSTVAWVGEAGGAYNSGHNHVTNTFVFSFWYLDQLGMAASFD
TKTYCRQSLIGGNYGLLNTTTFVPNPDYYSALLFHRLMGRKVLATTFNGTNKVRAYTHCA
QKSKGITLLLINLDGNNTAQVEVSISNVIVTQPLNRNSAPLSAKSGVITREEYHLTAANG
DFQSQTVLLNGKPLTVDSSGGIPPLLPVRVDPSQPVTVGPYSIVFVHFPSIRVPACK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcctcccaaccaccttgggctgtttctatggctgtattatctggccatttct
ggctcaaaattcgtggcttcacagagcaacacaggagcccctgcagttgttcaaggcact
gcctacatcagtgggacaatatcagttgggacgacagatgttgatttcatctgtgctact
ctggattggtggcccccacagaaatgtgactatgggacttgtagctggagcactgcttcc
cttctcaatttggatcttacagatatagtcctgttgaacgcaatcaaagcattttctccc
ctgaaaattagaattggtggaacattgcaagataatgtccgataccaaactgtgggtgac
caaacaccatgtaccggatttgttcaaaatagtgcggacccgtttggcttcactcaaggt
tgcttacccatggctcgatgggatgcgctaaacgttttcttcaaagaggccggggcaaga
attatatttggactgaatgcattgactggaagaacagtaggttcagatggtacagctaca
ggagcctggaattctgccaatgccgaatctcttatcaagtatactatcaacaagggttac
accatcgatggctgggaatttggaaatgagttaagtgggagtggaatcgtagcaagcgtt
gccgcggaccaatacgcggccgacacgatctctctccaaaacttggtgcagaaacactac
agaggatttacgctgacgcctatcgtcctcgggccgggaggcttcttcgatgcaacttgg
ttcccagaatacattcaaaaatcacaaaactctctccaagtggtcactcaccacatttac
aacctgggtgcaggcgtcgacgatcacttggttgacaagatccttgatccaaactatctt
ggtggtgaatcccagaccttcagcagccttcaaaccattctaaagaactctggaacttca
acagtggcatgggttggtgaagccggtggagcttataacagtggccataatcatgtcact
aatacatttgttttcagcttttggtacttggatcagcttggaatggcagcctctttcgat
acgaaaacatactgtagacaatcgctcattggtggaaactatggcctactcaacactact
acctttgttccgaatcccgattactacagtgctcttctttttcaccggctcatgggaaga
aaagtcctggcaactaccttcaacgggacaaataaagtccgcgcttacactcactgtgcc
caaaaatctaaaggaatcacattgctcttgataaacctagatggaaacaacacagcacaa
gttgaggtttccatttcaaatgtgatagtgacacaaccccttaatcggaactcagcgccc
ctgtctgcaaagtctggtgtcataacaagagaagaataccatttaacagccgcaaacgga
gatttccagagccaaacagtgcttctaaatgggaaaccactaaccgtggattcctctgga
ggaattcctcccttgctacccgtgagggtggacccttcacaacctgtaactgttggtcct
tactctatagtgtttgttcactttcccagtattcgggttcctgcttgtaagtag
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