Rhododendron vialii: 131317860
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Entry
131317860 CDS
T09330
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131317860
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
131317860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR5
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
WDR55
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
Beta-prop_HPS5
WD40_Gbeta
Cytochrom_D1
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_EIPR1
WDR54
PEP5_VPS11_N
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
131317860
NCBI-ProteinID:
XP_058203509
LinkDB
All DBs
Position
2a:complement(42575478..42594861)
Genome browser
AA seq
539 aa
AA seq
DB search
MGVKKEDGSLSKIMPPEEQDILDEMDIKVKKYLRGDSANFEALRDKKLKGQLAAREELYG
KSAKAAAKVEKWLMPSEGGYLEAEGIEKTWRIKQEAIVREVDISSSKNQYDIVLPDLGPY
TLDFTSSGRYMAVAGRKGHLAIIDMMNMSLIKELQVRETVRDVVFLHNELFFAAAQKKYT
YIYNRDGTELHCLKEHGAVSKLQFLKNHFLLASINKFGQLHYQDVTTGLMVGNFRTGLGG
SDVMQVNPFNNVVALGHSNGSVTMWKPTSAAPLVKMLTHHGPVSALSFHSNGHLMATAGT
DRKIKIWDLRKFEVLQTLPGHAKTLDFSQKGLLATSTGSFVQILGDFSGSQNYSRYMTHS
IAKGYQIRKVLFRPYEDVLGLGHSMGWSSILIPGSGEPNFDSWVANPFETPKQRREKEVR
SLLDKLPPETIMLDPKKIGNLRPPTRRKEKPSKVEREAEMEAAVADAKNSVSTKRKTKGR
SKPSRRAKKMEQAVERAKRPFLEQQKQEEELSKNKKQKTSEQSELPKSLQRFVSKKAAS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaaaaaagaggatggttctctttccaagattatgcctcctgaagaacaggat
attttagatgagatggatattaaggtaaagaagtatcttagaggtgacagtgctaatttt
gaggctttgagagacaaaaaattgaaaggtcagcttgctgctagagaggagttatatgga
aaatctgccaaggctgctgccaaggttgagaagtggcttatgccaagcgagggggggtac
ttggaggctgaaggtatagagaagacttggaggatcaaacaggaggcaattgttcgtgaa
gtcgatatatcaagttcaaagaatcaatacgatattgtcttaccagatcttggtccatac
acactggatttcacctcaagtggtcggtacatggcagttgcaggacgcaagggccatctg
gctattatagacatgatgaatatgagtcttatcaaagaattgcaagtcagagaaacagtg
cgtgatgtggtcttcttgcacaatgagctgttctttgctgctgcccaaaaaaagtacaca
tacatttataaccgggatggcacagagcttcactgtctgaaggagcatggtgcagtatcg
aaactccaatttctgaagaaccatttcctcttggcatccattaacaaatttggacagctc
cactatcaagatgtcactacgggcttaatggtaggtaatttcagaactggcctcggcggt
tctgacgtgatgcaggtgaatcctttcaacaacgtcgtcgctttgggccattctaatggg
tcagtaaccatgtggaagcccactagtgctgctccccttgtcaagatgctgactcatcac
ggcccggtttccgccttatcatttcactccaatggccatctcatggcaacagccgggact
gatcggaaaataaagatttgggatttgaggaaatttgaagttcttcaaactttacctgga
catgcgaaaacattggatttcagtcagaaaggtttgcttgctacttctactggttctttc
gtacagattttgggagatttctctggatctcaaaattatagccgttacatgacgcattcg
attgccaaaggttaccaaatacggaaagttttgttccgaccgtatgaagatgttctaggg
cttgggcattctatgggttggtcttcgattcttatccctggatctggagaacccaatttt
gattcttgggtggcaaacccttttgaaacgccgaagcagaggagggaaaaagaagtgcgg
tctcttctagacaaactccctccggagacaattatgttggacccaaaaaagattggtaat
ttgaggccacctacaaggaggaaagagaagccgagcaaggtggagagagaagccgagatg
gaagctgccgttgcagatgccaagaacagcgtttcgactaagaggaaaacaaaggggagg
agcaaaccgagtaggagagcaaagaagatggagcaagctgtcgagagagccaagaggcct
ttcttggagcaacaaaagcaggaggaagaattgtctaagaataagaagcagaagactagt
gagcaaagtgaactgccaaagtctttgcagcggtttgtttccaagaaagctgcatcatga
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