Rhododendron vialii: 131317896
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Entry
131317896 CDS
T09330
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00061
Fatty acid biosynthesis
rvl00071
Fatty acid degradation
rvl01100
Metabolic pathways
rvl01212
Fatty acid metabolism
rvl04146
Peroxisome
Module
rvl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
131317896
00071 Fatty acid degradation
131317896
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
131317896
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rvl01004
]
131317896
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rvl04147
]
131317896
Enzymes [BR:
rvl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
131317896
Lipid biosynthesis proteins [BR:
rvl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
131317896
Exosome [BR:
rvl04147
]
Exosomal proteins
Exosomal proteins of breast milk
131317896
Exosomal proteins of breast cancer cells
131317896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
131317896
NCBI-ProteinID:
XP_058203562
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All DBs
Position
2a:complement(45824332..45837852)
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AA seq
683 aa
AA seq
DB search
MAPLKTSKVSSMSPAKRFVVEVTDSPTTGPVYRSAIATEGPLVQGGDTCWDNFRMSVDKY
PNNSMLGQREILNGKAGKYVWLTYKEVYDTVMKLGNSIRSCGVEDGGRCGIYGANCSEWV
ISMQACNAHRLTCVPLYDTLGANAVEYIINHAEVTIAFAHEKKVPELLKTFPNTTKYLKT
IVSFGDVTPEQREEVKKFGLALYTWHEFLVLGENKQYDLPAKKKSDICTIMYTSGTTGDP
KGVMITNNSIINVVVGMNRVLQENVNEPFNEKDVYFSYLPLAHIFDRVIEEILIRHGGSI
GFWRGDVKLLTEDLGALKPSIFCAVPRVLDMIYTGLKNKISSGSLVKRSLFDIAYRSKLD
RMKKGMKHTEAAPNFDKIVFSKVKQALGGNVRLIICGAAPLARHVETFFRVTSCAYVIQG
YGLTETCAGSFLATPDVMNMTGTVGSPVPNVEVRLESVFEMGYDALASTPRGEICMKGET
VFSGYYKREDLTKEVLVDGWFHTGDVGEWQPDGSMKIIDRKKNIFKLAQGEYVAVEKLES
VYGGVPGIDSIWVYGNSFESFLIAVLNPNKAALERWAEENGIPTRDFNSLCENPRAKAYV
LGELAKVAREKKLKGFEFIKAVHLDPVPFNMDRDLLTPTFKKKRPQLLKYYQNTINNMYE
STGTNLQSMRQPRCQRFFMSSKP
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggctccgttgaagacaagcaaagtgtcctcgatgtcgccggcaaagaggttcgtggta
gaggtgacggattcgcctacgactggaccagtgtatcgcagtgcgatagccacagaaggt
ccgttggttcaaggcggggacacctgttgggataatttccgcatgtccgtggacaaatat
ccaaataattcgatgctcggtcagcgggagattctcaatggaaaggctggcaaatatgta
tggctaacgtacaaagaagtatatgacaccgtaatgaaacttggaaactctatccgcagc
tgtggtgttgaggatggaggacgatgtggtatctatggggccaattgctcagagtgggtc
ataagcatgcaggcatgcaacgcgcatcgacttacttgtgttcctttatacgataccctt
ggtgctaatgctgtggaatatataatcaaccatgcagaggttacgattgcttttgcgcat
gaaaagaaggttccagagctgctgaaaactttccctaacacaacaaaatacttgaaaaca
attgtgagctttggcgatgttactcctgaacaaagagaagaagttaaaaagtttggtctg
gccctatatacttggcatgaatttttggtattgggagaaaataagcagtatgatcttcca
gcaaagaagaaatctgatatttgtacaataatgtataccagtggcaccactggtgacccg
aagggtgttatgatcaccaataatagcattataaatgttgttgttgggatgaaccgtgtg
ctgcaagagaatgtgaatgaaccgttcaacgaaaaggatgtttatttttcatatcttcct
ctggcacatatatttgatcgtgtgattgaggagattcttatccgtcatggcggctcaata
ggattctggcgtggggatgtcaagctattgactgaagatcttggtgcgctgaaaccttct
attttttgtgctgttcccagagtattggacatgatttatacaggtttgaaaaacaagatt
tcttctgggagtctcgttaagcgttctttgtttgacatcgcatacagaagcaaacttgac
cgtatgaagaaggggatgaaacatacggaggcagccccaaattttgacaaaatcgttttc
agtaaggtaaagcaagcactaggggggaatgtacggcttattatatgcggagctgcaccc
ctcgctaggcatgtagaaacctttttccgagtcacgagttgtgcatatgttattcaagga
tatggtctgacagaaacctgcgcgggatcatttctcgcaacaccagatgtgatgaatatg
actggtacagtgggttctccagtgcccaatgtggaagtacgcctagaatctgtctttgag
atgggatacgatgcccttgcaagcacaccgcgcggagaaatctgtatgaagggcgagaca
gtgttctcagggtactataaacgcgaagacctcacaaaagaggtcctggttgatggatgg
ttccatacaggggatgtcggagaatggcaaccagacgggagcatgaaaattattgaccgg
aagaagaacattttcaaacttgcacaaggagaatatgttgctgttgaaaagttggagagt
gtttatggtggtgtccctggtattgactcgatatgggtatacgggaacagtttcgagtct
ttccttattgctgttcttaacccgaataaagcagcactggaacgttgggctgaagaaaat
ggtattcctactagggatttcaattccctctgtgaaaatcccagggcaaaagcttacgta
ctcggagagctagcaaaagttgcaagagaaaagaagttgaaaggttttgagttcataaaa
gctgttcatctcgacccggtgccattcaacatggatcgcgaccttctcaccccaacattc
aagaagaaaaggcctcagttgctcaaatactaccagaatactattaacaacatgtacgag
agcacaggtacaaatttgcaaagtatgcggcagcctcgttgccagaggttttttatgagc
tcaaagccctaa
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