Rhododendron vialii: 131318082
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Entry
131318082 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131318082
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
rvl
Rhododendron vialii
Pathway
rvl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131318082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131318082
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
131318082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D3
Nrap_D4
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
131318082
NCBI-ProteinID:
XP_058203869
LinkDB
All DBs
Position
2a:8987939..8999527
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AA seq
1054 aa
AA seq
DB search
MASDTLNGPTNLKVRELLKEVQLDYSPSFTKLVDDTVSAIKDAIDRIPQDLQVTADVAPG
FVRDIGADKVEFTFKKPISVEIGGSYSMRCIAKPDVNVDVFVRMPKEMFHEKDYLNHRYH
AKRFLYLCIIKRYLKLSSVAEKVEWSTFQNESRKPILVVHPAMRIAEAPIVLLRIIPTAT
LVFNVVKLNMKRNNIRALNQGAVLQPTPKYNSSILEDLFLEDNAEFVRRTFLGWNELGEA
LILLKVWARQRSSIYTHDCLSGFLISVIMAYLASKSGGNRIKKSMNTMQIFRVMMDFIAA
SKVWETGLFFHPQGEWNTSKEERRTSLQSFPVIMCDQFAGFNLTFRMTKGGFLELRNEAA
LTISGIDKCRDGGFDEVFMTKVDFPAKYDYCIRLNLKGSTEVNALGFCSDDECWRSYEQK
VLSLMHQGLNDRAKVIRVIWRNTPLGCNLEDGLSMFDREPLLIGISVNTLENALRVVDIG
PNAENKNEALKFRKFWGDKAELRRFKDGTIAESTVWECKQWERHLIIKSISEHVLMRHLS
LSQESITTIVDQLDFSLCYGNEDPLSFSASLLEAFGVLSKHLRLLDDIPLTVSSVQPLDP
AFRFTSVFPPKPHPLALEKGVKQRFQSLTSSCIQSLEVMIQLEGSGNWPMGDVAVEKTKS
AFLLKIGQSLQSNWGMICNATEDDVVVFTSGYAFRLKILHEKGLTLTKWPMGSNQVKRVP
STDKILYMRSQHASMINGLQGRYPIYGPVVRLAKRWVAAHLLSTSLGEEAIELLVAYLFL
KPLPFHAPSSRITGFLRFLRLLSEYDWAFSALVVDINGDLTLNDEKEVNGNFISSRKAYE
ENMQNASPAMFLATAYDKVSEAWTRSSPTSSELRRLAAYAKSSANLLAKLNLEDQLDSYR
WECLFRTPLSNYNAIVLLHRDRLPYPQHLLFPSEVNQGMHVVRGKPSKKFHPFLLPGDMK
GSLEELKHKLMVNFDPLRCFVGDIEAKFPNKFKVWYDSLGGDAIGLTWEQSGSKKRGREE
IAEEEDLFNVLKSVGEAGKGFVRSIYLPKAPKLK
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagacacgttgaacggaccaacgaacttgaaagtgagagaactactgaaggag
gtccagctcgactactccccttccttcactaagctcgtcgacgacaccgtttcagccatc
aaagacgccattgacagaatcccccaagacttacaggttacagcagatgttgcaccgggt
tttgtcagagatattggtgccgacaaagtggaatttacgttcaagaagccgatatctgta
gaaattgggggtagttattcgatgcgttgcattgctaagccggatgtgaatgtggatgtt
tttgttcgaatgccaaaggagatgttccatgagaaggattatttaaatcatcgttaccat
gccaaaagatttctttacctttgcataataaagaggtatctcaaactttcttcagtagct
gagaaggttgaatggtccacgtttcaaaacgagtctaggaagcctatattggttgtccat
ccagctatgaggattgctgaagcccctattgttttgttaaggataattcccacagcaaca
ttggtatttaacgtagtaaagttgaacatgaagcggaacaacattcgtgctctgaatcaa
ggggctgttcttcaacctactccgaagtacaatagtagtatactagaagacttgttcctc
gaggataatgcagaatttgtcagaagaacttttcttggctggaatgaactaggagaggct
ttgattttgctcaaagtttgggctcggcaaagaagttcaatatatacccatgattgctta
agtggattcctaatttctgtcataatggcgtaccttgcatcaaaatctggtgggaatcgc
ataaagaagtcaatgaacacaatgcagatatttcgagtcatgatggatttcattgctgct
tcaaaagtatgggagactgggctctttttccatccccaaggcgagtggaatacttccaag
gaggaaaggaggacatctttacagtcatttccagtaatcatgtgcgaccagtttgctggc
tttaatttgacattccgcatgacaaagggtggttttcttgagctccgaaatgaggctgct
ctgaccattagtggcattgataagtgcagagatggtggattcgatgaggtttttatgacc
aaagttgactttcctgctaaatatgactactgcataaggttgaacttgaaggggtctaca
gaagtcaatgccttgggattttgctcggacgacgaatgttggagatcgtatgagcagaaa
gtactttctctgatgcatcaagggttaaatgatagagcaaaggtcatccgtgttatttgg
aggaacactcctttaggatgcaatttggaagatggtttgtctatgtttgatagagagcca
ttgctcatcgggatttcagtcaacactttagagaatgctcttagagtcgttgacattggt
ccaaatgccgagaacaaaaatgaggctctcaaattccggaagttttggggagataaggca
gagctgcggagatttaaagatggcacaattgcagaaagcaccgtgtgggaatgcaagcaa
tgggaaagacatcttattataaagagcatttcagagcatgttctgatgcgtcatctttcc
ctttcacaagaaagtatcacaaccattgtggatcaacttgatttttctctttgctatggc
aatgaagatcctttatcattttctgcaagtttacttgaggcatttggggttttgtcgaag
catttgcgtcttcttgatgacattcccttgacggtatcaagtgtgcagcctctagatcca
gctttcaggttcacatctgtcttccctcccaaacctcatcccttggctcttgaaaaaggt
gtcaaacaaaggttccaaagcctcacttcatcctgcattcaatctcttgaagttatgatc
cagttggaaggttctgggaactggccaatgggtgatgtagccgttgagaagactaaatct
gcattccttctcaaaattggtcaaagcctccagagcaattggggaatgatatgtaatgct
actgaggatgatgtggttgttttcacatctggatatgcatttcgacttaaaattttgcat
gaaaaagggcttaccttgacgaaatggccaatgggaagtaatcaagtgaaacgggtccca
tcaaccgacaagatcctttacatgcggagccagcatgcgagcatgattaatggtttacaa
ggtcgttacccaatctatgggcctgttgttcggcttgcaaaacgctgggttgctgcacat
cttctttcaacttccttgggggaggaagcaattgagctgttggttgcttatctttttctg
aagcctttgccatttcatgctccttcctcacggatcactggatttctaaggttcttaaga
ttactgtcggagtatgactgggccttttctgctttagttgttgacataaatggtgatttg
acgctgaatgacgaaaaagaggtcaatggaaactttatatcgagtagaaaagcctacgaa
gaaaacatgcaaaatgcaagcccagccatgttcttggctactgcttacgacaaggtatct
gaagcttggaccagatcatcaccaacctcatcagaacttagaagattggcggcttacgca
aaaagcagtgcaaatttgttagcaaaactcaacttggaggatcaacttgattcgtacaga
tgggagtgccttttccgaactcctttgagcaactacaatgccattgtgcttctccacagg
gatagattgccttacccacaacatcttctcttcccttctgaagtgaaccaagggatgcac
gtggtacgtgggaagccaagcaagaaattccatccctttctattgcctggagacatgaaa
gggagcttagaggaactgaaacataagctgatggtgaactttgatcctctgagatgcttt
gttggtgatatagaggcaaagttccccaacaagttcaaagtttggtatgattcgcttggg
ggtgatgctattggcttaacgtgggagcaatcgggatcaaagaaacggggacgagaagaa
atagctgaggaagaagatctgtttaatgtactaaaatctgttggtgaggctgggaaaggt
ttcgtgaggagtatttatcttcccaaggccccaaagctaaaataa
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