Rhododendron vialii: 131318083
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Entry
131318083 CDS
T09330
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
131318083
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rvl01002
]
131318083
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131318083
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131318083
Peptidases and inhibitors [BR:
rvl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131318083
Ubiquitin system [BR:
rvl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131318083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
131318083
NCBI-ProteinID:
XP_058203870
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All DBs
Position
2a:8826736..8835173
Genome browser
AA seq
1007 aa
AA seq
DB search
MGKKVKKKARSVHKEKQPSTLSTKTVAHPQQSITSTAAVDDVIKERKLCSHLDQVIDLVK
VSSRLESQERIRCEDCREVVVDRRSSKGKGNQGKKKGGGSGDTKSSSKAMWVCLDCGHIS
CGGIGLPNTPQSHAVRHARQTRHPWAIQFENPQLRWCFQCNTLIPVETLDENGEKKDLLL
GVVKLIKGQSSQGPSEDVEDGWSGSGSVASGIKSANTASASFDGKYGNVVRGLVNLGNTC
FFNSIMQNLLAMDRLRDYFLELDESVGSLTVSLKKFFLEASPESGLKNSMNPRSFFGCLC
AKAPQFRGYQQHDSHELLRCLLDGLCTEELSARKQTVSWENGNSKTLGPTFVDAAFGGQL
SSTVSCLECGHSSTVFEPFLDLSLPVPTKKPPSKRAPPVPRAKKPKLPPKRSGRIRPKTN
RDADSVTEKVGDSLVVPKTMEFTGPPTVEDKKCLVSSSLSTAEDLEKKPFMDEDSLDNFS
WFDYLESVPVSNDQDIASKANDIAMIYDSGQNNAAQGEASLKETGTADSLGDLTWLDYLE
PGALPDDNDIGSNVDDVSVVQDSGSKDALPNDIFLLPLQVQVSEDLVFPQKEETSISGEI
LRGEGEASSSVVGYEPDASDFDGFGGLFNEPEIVEGPNLKSLSIDTNIQGNEIAETGFLV
ANISESDPDEVDNSDSPVSIESCLALFTKPELLSDEHAWHCENCSKAVQKQRMQSRKSKQ
NGASEIQMRGADNRIQSAPSNSTNEGPFPNDGDIRETVFSTSNEAVVSENGKINDNQNEK
EFSEEAGLILSISQLKEGSSDMNDACPELSQSSSSYKTCTQASISGEASGSCSVNDPSNA
GCDTGEVQQMKSQLLPKGSESERSDNEEMNSDSLKVKRDATKRILINRAPPILTIHLKRF
SQDARGRLSKLNGHVVFGETIDLRPYLDPRCMGADEYKFRLIGVVEHLGTMRGGHYVAYV
RAAKGNKKVDKESADFVWYHASDAYVREASMEEVLRCEAYIMFYEKL
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaggttaagaagaaggcccgtagtgttcataaggagaagcagccttctacc
ctttctacaaaaactgttgcccatccccagcaaagcattacaagcactgcggctgttgat
gatgtcataaaagagaggaagctatgttctcatcttgatcaggtcattgatttggtcaaa
gtttcttcaagattagaatctcaagaacgtattaggtgcgaagattgtagggaagttgtg
gttgataggcggtcaagtaaggggaagggcaatcaagggaagaagaaagggggaggttct
ggtgatactaaatccagttccaaagcaatgtgggtatgtttggattgtggccatatttca
tgtggagggattggactcccgaacacccctcaaagccatgcagttcgacatgcaaggcaa
acccgacatccatgggcaattcaatttgaaaaccctcagttacggtggtgcttccagtgc
aatacactcattccagttgaaactttggatgaaaatggtgaaaagaaagatttgttgtta
ggtgttgtcaaactgataaaggggcaatcatctcaagggccctctgaggatgttgaggat
ggttggtcagggagtggaagcgttgcaagtgggataaaatcggcaaacaccgcttcagct
agttttgatgggaaatatggtaatgtggtcagaggcttggtaaatctcggtaatacttgt
ttcttcaattcaatcatgcagaatctcttggcaatggatagattacgggactatttctta
gaacttgatgagtctgtggggtcgcttactgtttctttgaagaagttcttcttagaagcc
agtccggagtctggcttgaaaaattccatgaatccaaggtccttttttgggtgtctgtgt
gccaaggctccccaatttcgggggtatcaacagcacgacagtcacgaattgcttcgttgt
ttacttgatggattgtgtacagaggagttgagcgcaagaaaacagaccgtatcatgggaa
aatgggaattccaaaaccctcggtcctacttttgttgatgcagcctttgggggccaacta
tctagtactgtttcttgtttggagtgtgggcattcttcaacagtgtttgagccgtttcta
gatctctcacttccagttccaactaagaaacccccttctaaaagggccccacctgttcct
cgagctaagaagccaaaactgcctccaaaaagaagtggaaggattcgcccgaaaactaat
agggatgcagattctgtcacagaaaaagtgggagattctttggtggttcctaaaacgatg
gaattcactggcccacctacagtggaagataaaaagtgtttagtctcatctagtctctca
accgctgaagatttagagaagaagccgtttatggatgaggattcgttagacaacttttca
tggtttgattatctggaatcagttcctgtttcgaatgatcaggacatagcttcaaaagct
aatgatatcgcaatgatttatgattcaggacaaaacaatgctgctcaaggtgaagcctcc
ctgaaggaaacaggcacagcagattcattgggcgacctaacatggttggattaccttgag
ccaggtgctttacctgatgacaatgacattggttcaaatgttgatgatgtatccgtagtc
caagattctggaagcaaggacgctcttccaaatgatatatttttgcttccattacaggtt
caagtctccgaggacctggtgtttcctcagaaagaagaaacttcgattagtggtgagatt
ttgagaggagaaggcgaggcctcctcgtcagttgttggctatgaaccagatgcatcggac
tttgatggttttggaggcttatttaatgagccagaaattgttgaaggccccaatttaaaa
tccttgtctattgatactaacattcagggtaatgaaattgcagaaactggtttcttagtt
gcaaatatcagtgagtctgatccagatgaagtcgacaatagtgactccccagtgtcaata
gagagttgtttggcattgtttactaagccagagcttctttctgatgaacatgcttggcat
tgtgagaattgttcgaaagctgtgcaaaagcaaaggatgcaatcaaggaagagtaagcag
aatggtgcatcagagattcagatgagaggggcagacaatagaattcaaagtgctccatca
aattcgacaaatgaaggccccttccctaatgacggagatattagagaaactgtatttagt
acgtctaatgaagcggtagtgtcagaaaatggtaaaattaatgataaccaaaacgagaag
gagttcagtgaggaagctgggttgattttatcaatttcccagttaaaagaaggaagtagt
gacatgaatgatgcatgtccagagctatcacagtcttcaagttcttataagacttgtact
caagcaagtatcagtggtgaagctagtggttcttgcagtgttaatgatcctagtaatgct
ggatgtgacactggtgaggttcagcaaatgaagtctcagttgttgcctaaagggtctgaa
tcagaaagaagtgacaatgaggagatgaattctgatagcttgaaggtgaagagggatgca
actaaaagaattctcattaatagggcaccacctattttgaccatccatctaaagagattc
agtcaagatgctcgtggtcgtttgagcaaattgaatggtcatgtggttttcggagagaca
attgatctcagaccatacttggatcccaggtgcatgggggcagatgagtacaaattccgg
ctgattggagtggtggagcatctggggaccatgaggggaggccactatgttgcctatgtc
agagctgcaaagggtaacaagaaggtggataaagaaagcgcagattttgtgtggtatcat
gccagtgatgcttatgtgcgcgaggcttcaatggaagaagttcttcggtgtgaggcctac
atcatgttttacgaaaaactttga
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